Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective C Fraser, K Lythgoe, GE Leventhal, G Shirreff, TD Hollingsworth, S Alizon, ... Science 343 (6177), 1243727, 2014 | 287 | 2014 |
Evolution and emergence of infectious diseases in theoretical and real-world networks GE Leventhal, AL Hill, MA Nowak, S Bonhoeffer Nature Communications 6, 6101, 2015 | 144 | 2015 |
Exploring the Complexity of the HIV-1 Fitness Landscape RD Kouyos, GE Leventhal, T Hinkley, M Haddad, JM Whitcomb, ... PLoS Genetics 8 (3), e1002551, 2012 | 126 | 2012 |
Inferring Epidemic Contact Structure from Phylogenetic Trees GE Leventhal, R Kouyos, T Stadler, V von Wyl, S Yerly, J Böni, C Cellerai, ... PLoS Computational Biology 8 (3), e1002413, 2012 | 120 | 2012 |
Micro-scale ecology regulates particulate organic matter turnover in model marine microbial communities TN Enke, GE Leventhal, M Metzger, JT Saavedra, OX Cordero Nature Communications 9, 2743, 2018 | 116 | 2018 |
Context-dependent dynamics lead to the assembly of functionally distinct microbial communities LS Bittleston, M Gralka, GE Leventhal, I Mizrahi, OX Cordero Nature communications 11 (1), 1440, 2020 | 94 | 2020 |
Commensal Clostridiales strains mediate effective anti-cancer immune response against solid tumors A Montalban-Arques, E Katkeviciute, P Busenhart, A Bircher, J Wirbel, ... Cell host & microbe 29 (10), 1573-1588. e7, 2021 | 90 | 2021 |
Strain-level diversity drives alternative community types in millimeter scale granular biofilms G Leventhal, C Boix, U Kuechler, TN Enke, E Sliwerska, C Holliger, ... Nature Microbiology 3 (11), 1295-1303, 2018 | 82 | 2018 |
Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores GE Leventhal, M Ackermann, KT Schiessl Journal of the Royal Society Interface 16 (150), 20180674, 2019 | 75 | 2019 |
Using an epidemiological model for phylogenetic inference reveals density dependence in HIV transmission GE Leventhal, HF Günthard, S Bonhoeffer, T Stadler Molecular Biology and Evolution 31 (1), 6-17, 2014 | 75 | 2014 |
Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ... Molecular biology and evolution 34 (1), 185-203, 2017 | 71 | 2017 |
Microbiome-based interventions to modulate gut ecology and the immune system TCA Hitch, LJ Hall, SK Walsh, GE Leventhal, E Slack, T de Wouters, ... Mucosal immunology 15 (6), 1095-1113, 2022 | 62 | 2022 |
Novel integrative elements and genomic plasticity in ocean ecosystems T Hackl, R Laurenceau, MJ Ankenbrand, C Bliem, Z Cariani, E Thomas, ... Cell 186 (1), 47-62. e16, 2023 | 54 | 2023 |
Estimating epidemic incidence and prevalence from genomic data TG Vaughan, GE Leventhal, DA Rasmussen, AJ Drummond, D Welch, ... Molecular Biology and Evolution, msz106, 2019 | 53 | 2019 |
Interactions between strains govern the eco-evolutionary dynamics of microbial communities A Goyal, LS Bittleston, GE Leventhal, L Lu, OX Cordero Elife 11, e74987, 2022 | 51 | 2022 |
How well can the exponential-growth coalescent approximate constant-rate birth–death population dynamics? T Stadler, TG Vaughan, A Gavryushkin, S Guindon, D Kühnert, ... Proceedings of the Royal Society B: Biological Sciences 282 (1806), 20150420, 2015 | 46 | 2015 |
Dissecting HIV virulence: heritability of setpoint viral load, CD4+ T-cell decline, and per-parasite pathogenicity F Bertels, A Marzel, G Leventhal, V Mitov, J Fellay, HF Günthard, J Böni, ... Molecular biology and evolution 35 (1), 27-37, 2018 | 45 | 2018 |
Delayed virulence and limited costs promote fecundity compensation upon infection GE Leventhal, R Dünner, SM Barribeau American Naturalist 103 (4), 480-493, 2014 | 39 | 2014 |
How good are statistical models at approximating complex fitness landscapes? L Du Plessis, GE Leventhal, S Bonhoeffer Molecular biology and evolution 33 (9), 2454-2468, 2016 | 31 | 2016 |
Connecting the dots: network data and models in HIV epidemiology W Delva, GE Leventhal, S Helleringer Aids 30 (13), 2009-2020, 2016 | 31 | 2016 |