| Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases X Meng, MB Noyes, LJ Zhu, ND Lawson, SA Wolfe Nature biotechnology 26 (6), 695-701, 2008 | 949 | 2008 |
| Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites MB Noyes, RG Christensen, A Wakabayashi, GD Stormo, MH Brodsky, ... Cell 133 (7), 1277-1289, 2008 | 528 | 2008 |
| A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system MB Noyes, X Meng, A Wakabayashi, S Sinha, MH Brodsky, SA Wolfe Nucleic acids research 36 (8), 2547-2560, 2008 | 204 | 2008 |
| Synthetic gene expression perturbation systems with rapid, tunable, single-gene specificity in yeast RS McIsaac, BL Oakes, X Wang, KA Dummit, D Botstein, MB Noyes Nucleic acids research 41 (4), e57-e57, 2013 | 177 | 2013 |
| A systematic survey of the Cys2His2 zinc finger DNA-binding landscape AV Persikov, JL Wetzel, EF Rowland, BL Oakes, DJ Xu, M Singh, ... Nucleic acids research 43 (3), 1965-1984, 2015 | 123 | 2015 |
| Recognition models to predict DNA-binding specificities of homeodomain proteins RG Christensen, MS Enuameh, MB Noyes, MH Brodsky, SA Wolfe, ... Bioinformatics 28 (12), i84-i89, 2012 | 53 | 2012 |
| A yeast optogenetic toolkit (yOTK) for gene expression control in Saccharomyces cerevisiae J An‐adirekkun, CJ Stewart, SH Geller, MT Patel, J Melendez, BL Oakes, ... Biotechnology and bioengineering 117 (3), 886-893, 2020 | 46 | 2020 |
| Deep sequencing of large library selections allows computational discovery of diverse sets of zinc fingers that bind common targets AV Persikov, EF Rowland, BL Oakes, M Singh, MB Noyes Nucleic acids research 42 (3), 1497-1508, 2014 | 45 | 2014 |
| Exploring the DNA-recognition potential of homeodomains SW Chu, MB Noyes, RG Christensen, BG Pierce, LJ Zhu, Z Weng, ... Genome research 22 (10), 1889-1898, 2012 | 42 | 2012 |
| Characterization of the DNA-binding properties of the Mohawk homeobox transcription factor DM Anderson, R George, MB Noyes, M Rowton, W Liu, R Jiang, SA Wolfe, ... Journal of Biological Chemistry 287 (42), 35351-35359, 2012 | 35 | 2012 |
| Linking the environment, DAF-7/TGFβ signaling and LAG-2/DSL ligand expression in the germline stem cell niche O Pekar, MC Ow, KY Hui, MB Noyes, SE Hall, EJA Hubbard Development 144 (16), 2896-2906, 2017 | 33 | 2017 |
| The state of systems genetics in 2017 NS Baliga, JLM Björkegren, JD Boeke, M Boutros, NPS Crawford, ... Cell systems 4 (1), 7-15, 2017 | 31 | 2017 |
| A universal deep-learning model for zinc finger design enables transcription factor reprogramming DM Ichikawa, O Abdin, N Alerasool, M Kogenaru, AL Mueller, H Wen, ... Nature Biotechnology 41 (8), 1117-1129, 2023 | 30 | 2023 |
| Multi-reporter selection for the design of active and more specific zinc-finger nucleases for genome editing BL Oakes, DF Xia, EF Rowland, DJ Xu, I Ankoudinova, JS Borchardt, ... Nature Communications 7 (1), 10194, 2016 | 24 | 2016 |
| Analysis of specific protein–DNA interactions by bacterial one-hybrid assay MB Noyes Gene Regulatory Networks: Methods and Protocols, 79-95, 2012 | 19 | 2012 |
| Engineered dual selection for directed evolution of SpCas9 PAM specificity GW Goldberg, JM Spencer, DO Giganti, BR Camellato, N Agmon, ... Nature communications 12 (1), 349, 2021 | 17 | 2021 |
| Lineage context switches the function of a C. elegans Pax6 homolog in determining a neuronal fate JP Brandt, M Rossillo, Z Du, D Ichikawa, K Barnes, A Chen, M Noyes, ... Development 146 (8), dev168153, 2019 | 16 | 2019 |
| Manipulating the 3D organization of the largest synthetic yeast chromosome W Zhang, L Lazar-Stefanita, H Yamashita, MJ Shen, LA Mitchell, ... Molecular Cell 83 (23), 4424-4437. e5, 2023 | 15 | 2023 |
| Understanding DNA-binding specificity by bacteria hybrid selection DJ Xu, MB Noyes Briefings in functional genomics 14 (1), 3-16, 2015 | 11 | 2015 |
| The geometric influence on the Cys2His2 zinc finger domain and functional plasticity AL Mueller, C Corbi-Verge, DO Giganti, DM Ichikawa, JM Spencer, ... Nucleic Acids Research 48 (11), 6382-6402, 2020 | 10 | 2020 |
