OptFlux: an open-source software platform for in silico metabolic engineering I Rocha, P Maia, P Evangelista, P Vilaça, S Soares, JP Pinto, J Nielsen, ... BMC systems biology 4, 1-12, 2010 | 483 | 2010 |
Molecular aspects and comparative genomics of bacteriophage endolysins H Oliveira, LDR Melo, SB Santos, FL Nóbrega, EC Ferreira, N Cerca, ... Journal of virology 87 (8), 4558-4570, 2013 | 300 | 2013 |
Modeling formalisms in systems biology D Machado, RS Costa, M Rocha, EC Ferreira, B Tidor, I Rocha AMB express 1, 1-14, 2011 | 245 | 2011 |
Galacto-oligosaccharides production during lactose hydrolysis by free Aspergillus oryzae β-galactosidase and immobilized on magnetic polysiloxane-polyvinyl alcohol DFM Neri, VM Balcão, RS Costa, ICAP Rocha, EMFC Ferreira, ... Food Chemistry 115 (1), 92-99, 2009 | 214 | 2009 |
Reconstructing genome-scale metabolic models with merlin O Dias, M Rocha, EC Ferreira, I Rocha Nucleic acids research 43 (8), 3899-3910, 2015 | 176 | 2015 |
Activated sludge monitoring of a wastewater treatment plant using image analysis and partial least squares regression AL Amaral, EC Ferreira Analytica Chimica Acta 544 (1-2), 246-253, 2005 | 156 | 2005 |
Virtual laboratories in (bio) chemical engineering education L Domingues, I Rocha, F Dourado, M Alves, EC Ferreira Education for chemical engineers 5 (2), e22-e27, 2010 | 144 | 2010 |
The use of antibiotics to improve phage detection and enumeration by the double-layer agar technique SB Santos, CM Carvalho, S Sillankorva, A Nicolau, EC Ferreira, ... BMC microbiology 9, 1-10, 2009 | 142 | 2009 |
Natural computation meta-heuristics for the in silico optimization of microbial strains M Rocha, P Maia, R Mendes, JP Pinto, EC Ferreira, J Nielsen, KR Patil, ... BMC bioinformatics 9, 1-16, 2008 | 130 | 2008 |
Tuning of observer-based estimators: theory and application to the on-line estimation of kinetic parameters M Perrier, SF De Azevedo, EC Ferreira, D Dochain Control Engineering Practice 8 (4), 377-388, 2000 | 127 | 2000 |
Metabolic responses to recombinant bioprocesses in Escherichia coli S Carneiro, EC Ferreira, I Rocha Journal of biotechnology 164 (3), 396-408, 2013 | 125 | 2013 |
Identifying different types of bulking in an activated sludge system through quantitative image analysis DP Mesquita, AL Amaral, EC Ferreira Chemosphere 85 (4), 643-652, 2011 | 116 | 2011 |
Genomic and proteomic characterization of the broad-host-range Salmonella phage PVP-SE1: creation of a new phage genus SB Santos, AM Kropinski, PJ Ceyssens, HW Ackermann, A Villegas, ... Journal of virology 85 (21), 11265-11273, 2011 | 111 | 2011 |
Characterisation by image analysis of anaerobic sludge under shock conditions M Alves, AJ Cavaleiro, EC Ferreira, AL Amaral, M Mota, M da Motta, ... Water science and technology 41 (12), 207-214, 2000 | 107 | 2000 |
Activated sludge characterization through microscopy: A review on quantitative image analysis and chemometric techniques DP Mesquita, AL Amaral, EC Ferreira Analytica Chimica Acta 802, 14-28, 2013 | 104 | 2013 |
New PLS analysis approach to wine volatile compounds characterization by near infrared spectroscopy (NIR) Z Genisheva, C Quintelas, DP Mesquita, EC Ferreira, JM Oliveira, ... Food chemistry 246, 172-178, 2018 | 101 | 2018 |
An overview of the evolution of infrared spectroscopy applied to bacterial typing C Quintelas, EC Ferreira, JA Lopes, C Sousa Biotechnology journal 13 (1), 1700449, 2018 | 99 | 2018 |
Quantitative monitoring of an activated sludge reactor using on-line UV-visible and near-infrared spectroscopy MC Sarraguça, A Paulo, MM Alves, AMA Dias, JA Lopes, EC Ferreira Analytical and bioanalytical chemistry 395, 1159-1166, 2009 | 83 | 2009 |
Air pollution control with semi-infinite programming AIF Vaz, EC Ferreira Applied Mathematical Modelling 33 (4), 1957-1969, 2009 | 82 | 2009 |
Comparison of adsorption equilibrium of fructose, glucose and sucrose on potassium gel-type and macroporous sodium ion-exchange resins C Nobre, MJ Santos, A Dominguez, D Torres, O Rocha, AM Peres, ... Analytica chimica acta 654 (1), 71-76, 2009 | 78 | 2009 |