Mechanism of lignin inhibition of enzymatic biomass deconstruction JV Vermaas, L Petridis, X Qi, R Schulz, B Lindner, JC Smith Biotechnology for biofuels 8, 1-16, 2015 | 239 | 2015 |
Common processes drive the thermochemical pretreatment of lignocellulosic biomass P Langan, L Petridis, HM O'Neill, SV Pingali, M Foston, Y Nishiyama, ... Green Chemistry 16 (1), 63-68, 2014 | 235 | 2014 |
Supercomputer-based ensemble docking drug discovery pipeline with application to COVID-19 A Acharya, R Agarwal, MB Baker, J Baudry, D Bhowmik, S Boehm, ... Journal of chemical information and modeling 60 (12), 5832-5852, 2020 | 162 | 2020 |
Molecular-level driving forces in lignocellulosic biomass deconstruction for bioenergy L Petridis, JC Smith Nature Reviews Chemistry 2 (11), 382-389, 2018 | 141 | 2018 |
Simulation analysis of the temperature dependence of lignin structure and dynamics L Petridis, R Schulz, JC Smith Journal of the American Chemical Society 133 (50), 20277-20287, 2011 | 139 | 2011 |
Cosolvent pretreatment in cellulosic biofuel production: effect of tetrahydrofuran-water on lignin structure and dynamics MD Smith, B Mostofian, X Cheng, L Petridis, CM Cai, CE Wyman, ... Green Chemistry 18 (5), 1268-1277, 2016 | 134 | 2016 |
Scaling of multimillion-atom biological molecular dynamics simulation on a petascale supercomputer R Schulz, B Lindner, L Petridis, JC Smith Journal of Chemical Theory and Computation 5 (10), 2798-2808, 2009 | 134 | 2009 |
A structural study of CESA1 catalytic domain of Arabidopsis cellulose synthesis complex: evidence for CESA trimers VG Vandavasi, DK Putnam, Q Zhang, L Petridis, WT Heller, BT Nixon, ... Plant physiology 170 (1), 123-135, 2016 | 126 | 2016 |
Dynamics of water bound to crystalline cellulose H O’Neill, SV Pingali, L Petridis, J He, E Mamontov, L Hong, V Urban, ... Scientific reports 7 (1), 11840, 2017 | 111 | 2017 |
The role of histone tails in the nucleosome: a computational study J Erler, R Zhang, L Petridis, X Cheng, JC Smith, J Langowski Biophysical journal 107 (12), 2911-2922, 2014 | 102 | 2014 |
Local phase separation of co-solvents enhances pretreatment of biomass for bioenergy applications B Mostofian, CM Cai, MD Smith, L Petridis, X Cheng, CE Wyman, ... Journal of the American Chemical Society 138 (34), 10869-10878, 2016 | 92 | 2016 |
A molecular mechanics force field for lignin L Petridis, JC Smith Journal of computational chemistry 30 (3), 457-467, 2009 | 91 | 2009 |
Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation UR Shrestha, P Juneja, Q Zhang, V Gurumoorthy, JM Borreguero, ... Proceedings of the National Academy of Sciences 116 (41), 20446-20452, 2019 | 85 | 2019 |
Self-similar multiscale structure of lignin revealed by neutron scattering and molecular dynamics simulation L Petridis, SV Pingali, V Urban, WT Heller, HM O’Neill, M Foston, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 83 (6 …, 2011 | 83 | 2011 |
Molecular simulation as a tool for studying lignin AK Sangha, L Petridis, JC Smith, A Ziebell, JM Parks Environmental Progress & Sustainable Energy 31 (1), 47-54, 2012 | 73 | 2012 |
Neutron scattering in the biological sciences: progress and prospects R Ashkar, H Bilheux, H Bordallo, R Briber, DJE Callaway, X Cheng, ... Acta Crystallographica Section D: Structural Biology 74 (12), 1129-1168, 2018 | 71 | 2018 |
A multifunctional cosolvent pair reveals molecular principles of biomass deconstruction AS Patri, B Mostofian, Y Pu, N Ciaffone, M Soliman, MD Smith, R Kumar, ... Journal of the American Chemical Society 141 (32), 12545-12557, 2019 | 69 | 2019 |
Nematic-isotropic transition with quenched disorder L Petridis, EM Terentjev Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 74 (5 …, 2006 | 69 | 2006 |
Solvent-driven preferential association of lignin with regions of crystalline cellulose in molecular dynamics simulation B Lindner, L Petridis, R Schulz, JC Smith Biomacromolecules 14 (10), 3390-3398, 2013 | 67 | 2013 |
Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations UR Shrestha, JC Smith, L Petridis Communications biology 4 (1), 243, 2021 | 64 | 2021 |