| Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants SA Smith, MJ Moore, JW Brown, Y Yang BMC evolutionary biology 15 (1), 150, 2015 | 373 | 2015 |
| Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics Y Yang, SA Smith Molecular biology and evolution 31 (11), 3081-3092, 2014 | 313 | 2014 |
| Optimizing de novo assembly of short-read RNA-seq data for phylogenomics Y Yang, SA Smith BMC genomics 14, 1-11, 2013 | 230 | 2013 |
| Dissecting molecular evolution in the highly diverse plant clade Caryophyllales using transcriptome sequencing Y Yang, MJ Moore, SF Brockington, DE Soltis, GKS Wong, EJ Carpenter, ... Molecular Biology and Evolution 32 (8), 2001-2014, 2015 | 203 | 2015 |
| Practical considerations for plant phylogenomics MR McKain, MG Johnson, S Uribe‐Convers, D Eaton, Y Yang Applications in plant sciences 6 (3), e1038, 2018 | 184 | 2018 |
| Lineage‐specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales SF Brockington, Y Yang, F Gandia‐Herrero, S Covshoff, JM Hibberd, ... New Phytologist 207 (4), 1170-1180, 2015 | 171 | 2015 |
| Molecular phylogenetics and classification of Euphorbia subgenus Chamaesyce (Euphorbiaceae) Y Yang, R Riina, JJ Morawetz, T Haevermans, X Aubriot, PE Berry Taxon 61 (4), 764-789, 2012 | 152 | 2012 |
| Evolutionary bursts in Euphorbia (Euphorbiaceae) are linked with photosynthetic pathway JW Horn, Z Xi, R Riina, JA Peirson, Y Yang, BL Dorsey, PE Berry, ... Evolution 68 (12), 3485-3504, 2014 | 148 | 2014 |
| Disentangling Sources of Gene Tree Discordance in Phylogenomic Data Sets: Testing Ancient Hybridizations in Amaranthaceae sl DF Morales-Briones, G Kadereit, DT Tefarikis, MJ Moore, SA Smith, ... Systematic Biology 70 (2), 219-235, 2021 | 137 | 2021 |
| From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales JF Walker, Y Yang, T Feng, A Timoneda, J Mikenas, V Hutchison, ... American journal of botany 105 (3), 446-462, 2018 | 104 | 2018 |
| Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events Y Yang, MJ Moore, SF Brockington, J Mikenas, J Olivieri, JF Walker, ... New Phytologist 217 (2), 855-870, 2018 | 97 | 2018 |
| Phylogenetics of the Chamaesyce clade (Euphorbia, Euphorbiaceae): reticulate evolution and long-distance dispersal in a prominent C4 lineage Y Yang, PE Berry American Journal of Botany 98 (9), 1486-1503, 2011 | 93 | 2011 |
| Relaxation of tyrosine pathway regulation underlies the evolution of betalain pigmentation in Caryophyllales S Lopez‐Nieves, Y Yang, A Timoneda, M Wang, T Feng, SA Smith, ... New Phytologist 217 (2), 896-908, 2018 | 92 | 2018 |
| Disparity, diversity, and duplications in the Caryophyllales SA Smith, JW Brown, Y Yang, R Bruenn, CP Drummond, SF Brockington, ... New Phytologist 217 (2), 836-854, 2018 | 78 | 2018 |
| Evolution of Portulacineae marked by gene tree conflict and gene family expansion associated with adaptation to harsh environments N Wang, Y Yang, MJ Moore, SF Brockington, JF Walker, JW Brown, ... Molecular biology and evolution 36 (1), 112-126, 2019 | 61 | 2019 |
| Widespread paleopolyploidy, gene tree conflict, and recalcitrant relationships among the carnivorous Caryophyllales JF Walker, Y Yang, MJ Moore, J Mikenas, A Timoneda, SF Brockington, ... American Journal of Botany 104 (6), 858-867, 2017 | 60 | 2017 |
| Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla s.l. (Rosaceae) DF Morales-Briones, B Gehrke, CH Huang, A Liston, H Ma, HE Marx, ... Systematic Biology 71 (1), 190-207, 2022 | 38 | 2022 |
| Large-scale patterns of stomatal traits in Tibetan and Mongolian grassland species X Yang, Y Yang, C Ji, T Feng, Y Shi, L Lin, J Ma, JS He Basic and Applied Ecology 15 (2), 122-132, 2014 | 29 | 2014 |
| Differential retention contributes to racial/ethnic disparity in US academia AK Shaw, C Accolla, JM Chacón, TL Mueller, M Vaugeois, Y Yang, ... Plos one 16 (12), e0259710, 2021 | 25 | 2021 |
| An efficient field and laboratory workflow for plant phylotranscriptomic projects Y Yang, MJ Moore, SF Brockington, A Timoneda, T Feng, HE Marx, ... Applications in Plant Sciences 5 (3), 1600128, 2017 | 25 | 2017 |
Stephen A. SmithProfessor, University of Michigan在 umich.edu 的电子邮件经过验证
