SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data E Kopylova, L Noé, H Touzet Bioinformatics 28 (24), 3211-3217, 2012 | 2387 | 2012 |
YASS: enhancing the sensitivity of DNA similarity search L Noé, G Kucherov Nucleic acids research 33 (suppl_2), W540-W543, 2005 | 394 | 2005 |
A unifying framework for seed sensitivity and its application to subset seeds G Kucherov, L Noé, M Roytberg Journal of Bioinformatics and Computational Biology (JBCB) 4 (2), 553-569, 2006 | 115 | 2006 |
Improved hit criteria for DNA local alignment L Noé, G Kucherov BMC bioinformatics 5, 1-9, 2004 | 98 | 2004 |
Multiseed lossless filtration G Kucherov, L Noé, M Roytberg Transactions on Computational Biology and Bioinformatics (TCBB) 2 (1), 51-61, 2005 | 83 | 2005 |
Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing A Flissi, Y Dufresne, J Michalik, L Tonon, S Janot, L Noé, P Jacques, ... Nucleic Acids Research 44 (D1), D1113-D1118, 2016 | 61 | 2016 |
Estimating seed sensitivity on homogeneous alignments G Kucherov, L Noé, Y Ponty Proceedings of the Fourth IEEE Symposium on Bioinformatics and …, 2004 | 44 | 2004 |
Reconsidering the significance of genomic word frequencies M Csurös, L Noé, G Kucherov Trends in Genetics 23 (11), 543-546, 2007 | 43 | 2007 |
Improved search heuristics find 20 000 new alignments between human and mouse genomes MC Frith, L Noé Nucleic acids research 42 (7), e59-e59, 2014 | 36 | 2014 |
A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels and k-Mer Distances L Noé, DEK Martin Journal of Computational Biology (JCB) 21 (12), 947-963, 2014 | 32 | 2014 |
On subset seeds for protein alignment M Roytberg, A Gambin, L Noé, S Lasota, E Furletova, E Szczurek, ... Transactions on Computational Biology and Bioinformatics (TCBB) 6 (3), 483-494, 2009 | 29 | 2009 |
Multi-seed lossless filtration (Extended Abstract) G Kucherov, L Noé, M Roytberg Annual Symposium on Combinatorial Pattern Matching (CPM), 297-310, 2004 | 29* | 2004 |
Minimally overlapping words for sequence similarity search MC Frith, L Noé, G Kucherov Bioinformatics 36 (22-23), 5344-5350, 2020 | 24 | 2020 |
Protein similarity search with subset seeds on a dedicated reconfigurable hardware P Peterlongo, L Noé, D Lavenier, G Georges, J Jacques, G Kucherov, ... Parallel Processing and Applied Mathematics (PPAM), 1240-1248, 2008 | 23 | 2008 |
Subset seed automaton G Kucherov, L Noé, M Roytberg Conference on Implementation and Application of Automata (CIAA), 180-191, 2007 | 23 | 2007 |
Porechop_ABI: discovering unknown adapters in Oxford Nanopore Technology sequencing reads for downstream trimming Q Bonenfant, L Noé, H Touzet Bioinformatics Advances 3 (1), vbac085, 2023 | 22 | 2023 |
Best hits of 11110110111: model-free selection and parameter-free sensitivity calculation of spaced seeds L Noé Algorithms for Molecular Biology (AMB) 12 (1), 2017 | 22 | 2017 |
Back-translation for discovering distant protein homologies in the presence of frameshift mutations M Gîrdea, L Noé, G Kucherov Algorithms for Molecular Biology (AMB) 5 (6), 2010 | 22 | 2010 |
Smiles2Monomers: a link between chemical and biological structures for polymers Y Dufresne, L Noé, V Leclère, M Pupin Journal of cheminformatics 7, 1-11, 2015 | 20 | 2015 |
YASS: Similarity search in DNA sequences L Noé, G Kucherov Technical Report, 2003 | 20 | 2003 |