A general mechanism for the propagation of mutational effects in proteins N Rajasekaran, S Suresh, S Gopi, K Raman, AN Naganathan Biochemistry 56 (1), 294-305, 2017 | 55 | 2017 |
Genome-wide identification and functional annotation of miRNAs in anti-inflammatory plant and their cross-kingdom regulation in Homo sapiens A Sharma, S Sahu, P Kumari, SR Gopi, R Malhotra, S Biswas Journal of Biomolecular Structure and Dynamics 35 (7), 1389-1400, 2017 | 41 | 2017 |
Quantifying protein disorder through measures of excess conformational entropy N Rajasekaran, S Gopi, A Narayan, AN Naganathan The Journal of Physical Chemistry B 120 (19), 4341-4350, 2016 | 32 | 2016 |
Tunable order–disorder continuum in protein–DNA interactions S Munshi, S Gopi, G Asampille, S Subramanian, LA Campos, HS Atreya, ... Nucleic Acids Research 46 (17), 8700-8709, 2018 | 22 | 2018 |
Thermodynamics and folding landscapes of large proteins from a statistical mechanical model S Gopi, A Aranganathan, AN Naganathan Current Research in Structural Biology 1, 6-12, 2019 | 21 | 2019 |
Toward a quantitative description of microscopic pathway heterogeneity in protein folding S Gopi, A Singh, S Suresh, S Paul, S Ranu, AN Naganathan Physical Chemistry Chemical Physics 19 (31), 20891-20903, 2017 | 21 | 2017 |
Protein plasticity driven by disorder and collapse governs the heterogeneous binding of CytR to DNA S Munshi, S Gopi, S Subramanian, LA Campos, AN Naganathan Nucleic Acids Research 46 (8), 4044-4053, 2018 | 19 | 2018 |
pStab: prediction of stable mutants, unfolding curves, stability maps and protein electrostatic frustration S Gopi, D Devanshu, P Krishna, AN Naganathan Bioinformatics 34 (5), 875-877, 2018 | 15 | 2018 |
Energetic and topological determinants of a phosphorylation-induced disorder-to-order protein conformational switch S Gopi, N Rajasekaran, A Singh, S Ranu, AN Naganathan Physical Chemistry Chemical Physics 17 (41), 27264-27269, 2015 | 14 | 2015 |
A binding cooperativity switch driven by synergistic structural swelling of an osmo-regulatory protein pair A Narayan, S Gopi, D Fushman, AN Naganathan Nature communications 10 (1), 1995, 2019 | 11 | 2019 |
pPerturb: A server for predicting long-distance energetic couplings and mutation-induced stability changes in proteins via perturbations S Gopi, D Devanshu, N Rajasekaran, S Anantakrishnan, AN Naganathan ACS omega 5 (2), 1142-1146, 2020 | 10 | 2020 |
Electrostatic frustration shapes folding mechanistic differences in paralogous bacterial stress response proteins A Narayan, S Gopi, B Lukose, AN Naganathan Journal of molecular biology 432 (17), 4830-4839, 2020 | 9 | 2020 |
Folding intermediates, heterogeneous native ensembles and protein function AN Naganathan, R Dani, S Gopi, A Aranganathan, A Narayan Journal of Molecular Biology 433 (24), 167325, 2021 | 8 | 2021 |
Extracting the hidden distributions underlying the mean transition state structures in protein folding S Gopi, S Paul, S Ranu, AN Naganathan The journal of physical chemistry letters 9 (7), 1771-1777, 2018 | 7 | 2018 |
Diverse native ensembles dictate the differential functional responses of nuclear receptor ligand-binding domains S Gopi, B Lukose, AN Naganathan The Journal of Physical Chemistry B 125 (14), 3546-3555, 2021 | 6 | 2021 |
Non-specific DNA-driven quinary interactions promote structural transitions in proteins S Gopi, AN Naganathan Physical Chemistry Chemical Physics 22 (22), 12671-12677, 2020 | 6 | 2020 |
Dynamic association of the H3K64 trimethylation mark with genes encoding exported proteins in Plasmodium falciparum CA Jabeena, G Govindaraju, M Rawat, S Gopi, DV Sethumadhavan, ... Journal of Biological Chemistry 296, 2021 | 5 | 2021 |
Molecular dynamics simulations for the study of chromatin biology GB Brandani, S Gopi, M Yamauchi, S Takada Current Opinion in Structural Biology 77, 102485, 2022 | 4 | 2022 |
Structural–energetic basis for coupling between equilibrium fluctuations and phosphorylation in a protein native ensemble H Golla, A Kannan, S Gopi, S Murugan, LR Perumalsamy, ... ACS Central Science 8 (2), 282-293, 2022 | 4 | 2022 |
Genome wide analysis of Chlamydia pneumoniae for candidate vaccine development A Sharma, S Rajan G, R Kharb, S Biswas Current Computer-Aided Drug Design 12 (3), 206-215, 2016 | 4 | 2016 |