The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data E Cerami, J Gao, U Dogrusoz, BE Gross, SO Sumer, BA Aksoy, ... Cancer Discovery 2 (5), 401-404, 2012 | 14868* | 2012 |
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal J Gao, BA Aksoy, U Dogrusoz, G Dresdner, B Gross, SO Sumer, Y Sun, ... Science Signaling, scisignal. 2004088v1, 2013 | 13795 | 2013 |
Comprehensive molecular portraits of human breast tumours Brigham & Women’s Hospital & Harvard Medical School Chin Lynda 9 11 Park ... Nature 490 (7418), 61-70, 2012 | 11135 | 2012 |
Comprehensive molecular characterization of human colon and rectal cancer DM Muzny, MN Bainbridge, K Chang, HH Dinh, JA Drummond, G Fowler, ... Nature 487, 330-337, 2012 | 7480 | 2012 |
The somatic genomic landscape of glioblastoma CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ... cell 155 (2), 462-477, 2013 | 4983 | 2013 |
Integrated genomic characterization of endometrial carcinoma DA Levine, ... Nature 497 (7447), 67-73, 2013 | 4902 | 2013 |
Comprehensive genomic characterization of squamous cell lung cancers. PS Hammerman, DN Hayes, MD Wilkerson, N Schultz, R Bose, A Chu, ... Nature 489 (7417), 519-525, 2012 | 3676* | 2012 |
Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas Cancer Genome Atlas Research Network New England Journal of Medicine 372 (26), 2481-2498, 2015 | 2925 | 2015 |
Genomic classification of cutaneous melanoma R Akbani, KC Akdemir, B áArman Aksoy, M Albert, A Ally, SB Amin, ... Cell 161 (7), 1681-1696, 2015 | 2695 | 2015 |
Comprehensive molecular characterization of urothelial bladder carcinoma Cancer Genome Atlas Research Network Nature 507 (7492), 315, 2014 | 2624 | 2014 |
Integrated genomic characterization of papillary thyroid carcinoma N Agrawal, R Akbani, BA Aksoy, A Ally, H Arachchi, SL Asa, JT Auman, ... Cell 159 (3), 676-690, 2014 | 2530 | 2014 |
Emerging landscape of oncogenic signatures across human cancers G Ciriello, ML Miller, BA Aksoy, Y Senbabaoglu, N Schultz, C Sander Nature genetics 45 (10), 1127-1133, 2013 | 1505 | 2013 |
An integrated metabolic atlas of clear cell renal cell carcinoma AA Hakimi, ED Reznik, CH Lee, CJ Creighton, AR Brannon, A Luna, ... Cancer cell 29 (1), 104-116, 2016 | 663 | 2016 |
Characterization of HPV and host genome interactions in primary head and neck cancers M Parfenov, CS Pedamallu, N Gehlenborg, SS Freeman, L Danilova, ... Proceedings of the National Academy of Sciences 111 (43), 15544-15549, 2014 | 421 | 2014 |
Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: an exploratory multi-omic analysis A Snyder, T Nathanson, SA Funt, A Ahuja, J Buros Novik, MD Hellmann, ... PLoS medicine 14 (5), e1002309, 2017 | 293 | 2017 |
Pathway Commons 2019 Update: integration, analysis and exploration of pathway data I Rodchenkov, O Babur, A Luna, BA Aksoy, JV Wong, D Fong, M Franz, ... Nucleic acids research 48 (D1), D489-D497, 2020 | 272 | 2020 |
Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations Ö Babur, M Gönen, BA Aksoy, N Schultz, G Ciriello, C Sander, E Demir Genome biology 16, 1-10, 2015 | 173 | 2015 |
A landscape of metabolic variation across tumor types E Reznik, A Luna, BA Aksoy, EM Liu, K La, I Ostrovnaya, CJ Creighton, ... Cell systems 6 (3), 301-313. e3, 2018 | 148 | 2018 |
Genome-wide inference of natural selection on human transcription factor binding sites L Arbiza, I Gronau, BA Aksoy, MJ Hubisz, B Gulko, A Keinan, A Siepel Nature genetics 45 (7), 723-729, 2013 | 142 | 2013 |
Somatic mutations and neoepitope homology in melanomas treated with CTLA-4 blockade T Nathanson, A Ahuja, A Rubinsteyn, BA Aksoy, MD Hellmann, D Miao, ... Cancer immunology research 5 (1), 84-91, 2017 | 140* | 2017 |