MITOS: Improved de novo Metazoan Mitochondrial Genome Annotation M Bernt, A Donath, F Jühling, F Externbrink, C Florentz, G Fritzsch, J Pütz, ... Molecular Phylogenetics and Evolution, 2012 | 4621 | 2012 |
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes A Donath, F Jühling, M Al-Arab, SH Bernhart, F Reinhardt, PF Stadler, ... Nucleic acids research 47 (20), 10543-10552, 2019 | 425 | 2019 |
CREx: inferring genomic rearrangements based on common intervals M Bernt, D Merkle, K Ramsch, G Fritzsch, M Perseke, D Bernhard, ... Bioinformatics 23 (21), 2957-2958, 2007 | 313 | 2007 |
Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements F Jühling, J Pütz, M Bernt, A Donath, M Middendorf, C Florentz, PF Stadler Nucleic acids research 40 (7), 2833-2845, 2012 | 259 | 2012 |
Genetic aspects of mitochondrial genome evolution M Bernt, A Braband, B Schierwater, PF Stadler Molecular phylogenetics and evolution 69 (2), 328-338, 2013 | 256 | 2013 |
A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny M Bernt, C Bleidorn, A Braband, J Dambach, A Donath, G Fritzsch, ... Molecular Phylogenetics and Evolution 69 (2), 352-364, 2013 | 217 | 2013 |
Evolution of mitochondrial gene orders in echinoderms M Perseke, G Fritzsch, K Ramsch, M Bernt, D Merkle, M Middendorf, ... Molecular Phylogenetics and Evolution 47 (2), 855-864, 2008 | 97 | 2008 |
Mitogenomics at the base of Metazoa HJ Osigus, M Eitel, M Bernt, A Donath, B Schierwater Molecular Phylogenetics and Evolution 69 (2), 339-351, 2013 | 87 | 2013 |
An algorithm for inferring mitogenome rearrangements in a phylogenetic tree M Bernt, D Merkle, M Middendorf Comparative Genomics: International Workshop, RECOMB-CG 2008, Paris, France …, 2008 | 65 | 2008 |
GC skew and mitochondrial origins of replication AH Sahyoun, M Bernt, PF Stadler, K Tout Mitochondrion 17, 56-66, 2014 | 42 | 2014 |
Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences M Bernt, A Braband, M Middendorf, B Misof, O Rota-Stabelli, PF Stadler Molecular Phylogenetics and Evolution 69 (2), 320-327, 2013 | 42 | 2013 |
A method for computing an inventory of metazoan mitochondrial gene order rearrangements M Bernt, M Middendorf BMC bioinformatics 12, 1-11, 2011 | 42 | 2011 |
Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex A Duò, R Bruggmann, S Zoller, M Bernt, CR Grünig BMC genomics 13, 1-17, 2012 | 38 | 2012 |
Accurate annotation of protein-coding genes in mitochondrial genomes M Al Arab, CH Zu Siederdissen, K Tout, AH Sahyoun, PF Stadler, M Bernt Molecular phylogenetics and evolution 106, 209-216, 2017 | 32 | 2017 |
The enigmatic mitochondrial genome of Rhabdopleura compacta(Pterobranchia) reveals insights into selection of an efficient tRNA system and supports … M Perseke, J Hetmank, M Bernt, PF Stadler, M Schlegel, D Bernhard BMC Evolutionary Biology 11, 1-12, 2011 | 28 | 2011 |
Mitogenomics reveals a novel genetic code in Hemichordata. Y Li, KM Kocot, MG Tassia, JT Cannon, M Bernt, KM Halanych | 27 | 2018 |
Using median sets for inferring phylogenetic trees M Bernt, D Merkle, M Middendorf Bioinformatics 23 (2), e129-e135, 2007 | 27 | 2007 |
Towards a comprehensive picture of alloacceptor tRNA remolding in metazoan mitochondrial genomes AH Sahyoun, M Hölzer, F Jühling, C Höner zu Siederdissen, M Al-Arab, ... Nucleic Acids Research 43 (16), 8044-8056, 2015 | 25 | 2015 |
Genome rearrangement based on reversals that preserve conserved intervals M Bernt, D Merkle, M Middendorf IEEE/ACM Transactions on Computational Biology and Bioinformatics 3 (3), 275-288, 2006 | 23 | 2006 |
Finding All Sorting Tandem Duplication Random Loss Operations MM Matthias Bernt, Kuan-Yu Chen, Ming-Chiang Chen, An Combinatorial Pattern Matching, 301-313, 2009 | 21* | 2009 |