The genome sequence of segmental allotetraploid peanut Arachis hypogaea DJ Bertioli, J Jenkins, J Clevenger, O Dudchenko, D Gao, G Seijo, ... Nature genetics 51 (5), 877-884, 2019 | 499 | 2019 |
The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization RF McCormick, SK Truong, A Sreedasyam, J Jenkins, S Shu, D Sims, ... The Plant Journal 93 (2), 338-354, 2018 | 475 | 2018 |
A mosaic monoploid reference sequence for the highly complex genome of sugarcane O Garsmeur, G Droc, R Antonise, J Grimwood, B Potier, K Aitken, ... Nature communications 9 (1), 2638, 2018 | 355 | 2018 |
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement ZJ Chen, A Sreedasyam, A Ando, Q Song, LM De Santiago, ... Nature genetics 52 (5), 525-533, 2020 | 309 | 2020 |
DNA Cloning Strategies LJ Cseke, G Trivedi, A Sreedasyam, PB Kaufman, A Kirakosyan Handbook of Molecular and Cellular Methods in Biology and Medicine 3, 29-36, 2011 | 242* | 2011 |
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass JT Lovell, AH MacQueen, S Mamidi, J Bonnette, J Jenkins, JD Napier, ... Nature 590 (7846), 438-444, 2021 | 173 | 2021 |
A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci S Mamidi, A Healey, P Huang, J Grimwood, J Jenkins, K Barry, ... Nature Biotechnology 38 (10), 1203-1210, 2020 | 125 | 2020 |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii JT Lovell, J Jenkins, DB Lowry, S Mamidi, A Sreedasyam, X Weng, ... Nature communications 9 (1), 5213, 2018 | 100 | 2018 |
The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data PF Perroud, FB Haas, M Hiss, KK Ullrich, A Alboresi, M Amirebrahimi, ... The Plant Journal 95 (1), 168-182, 2018 | 98 | 2018 |
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes JT Lovell, A Sreedasyam, ME Schranz, M Wilson, JW Carlson, A Harkess, ... elife 11, e78526, 2022 | 93 | 2022 |
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa BT Hofmeister, J Denkena, M Colomé-Tatché, Y Shahryary, R Hazarika, ... Genome Biology 21, 1-27, 2020 | 91 | 2020 |
Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome PE Larsen, A Sreedasyam, G Trivedi, GK Podila, LJ Cseke, FR Collart BMC Systems Biology 5, 1-14, 2011 | 79 | 2011 |
Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics D Torkamaneh, J Laroche, B Valliyodan, L O’Donoughue, E Cober, ... Plant biotechnology journal 19 (2), 324-334, 2021 | 68 | 2021 |
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens N Fernandez‐Pozo, FB Haas, R Meyberg, KK Ullrich, M Hiss, PF Perroud, ... The Plant Journal 102 (1), 165-177, 2020 | 68 | 2020 |
The tepary bean genome provides insight into evolution and domestication under heat stress SM Moghaddam, A Oladzad, C Koh, L Ramsay, JP Hart, S Mamidi, ... Nature communications 12 (1), 2638, 2021 | 63 | 2021 |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding JT Lovell, NB Bentley, G Bhattarai, JW Jenkins, A Sreedasyam, Y Alarcon, ... Nature communications 12 (1), 4125, 2021 | 58 | 2021 |
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development SB Carey, J Jenkins, JT Lovell, F Maumus, A Sreedasyam, AC Payton, ... Science Advances 7 (27), eabh2488, 2021 | 57 | 2021 |
Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass JT Lovell, S Schwartz, DB Lowry, EV Shakirov, JE Bonnette, X Weng, ... Genome research 26 (4), 510-518, 2016 | 52 | 2016 |
Genome-wide analysis of lectin receptor-like kinases in Populus Y Yang, J Labbé, W Muchero, X Yang, SS Jawdy, M Kennedy, J Johnson, ... BMC genomics 17, 1-16, 2016 | 47 | 2016 |
Molecular and phenotypic diversity of ICARDA spring barley (Hordeum vulgare L.) collection R Amezrou, S Gyawali, L Belqadi, S Chao, M Arbaoui, S Mamidi, ... Genetic resources and crop evolution 65, 255-269, 2018 | 45 | 2018 |