| Oxford Nanopore R10. 4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing M Sereika, RH Kirkegaard, SM Karst, TY Michaelsen, EA Sørensen, ... Nature methods 19 (7), 823-826, 2022 | 260 | 2022 |
| Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing CM Singleton, F Petriglieri, JM Kristensen, RH Kirkegaard, TY Michaelsen, ... Nature communications 12 (1), 2009, 2021 | 191 | 2021 |
| Risk of hospitalisation associated with infection with SARS-CoV-2 lineage B. 1.1. 7 in Denmark: an observational cohort study P Bager, J Wohlfahrt, J Fonager, M Rasmussen, M Albertsen, ... The Lancet Infectious Diseases 21 (11), 1507-1517, 2021 | 142 | 2021 |
| Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics L Hao, TY Michaelsen, CM Singleton, G Dottorini, RH Kirkegaard, ... The ISME journal 14 (4), 906-918, 2020 | 125 | 2020 |
| The number of extranodal sites assessed by PET/CT scan is a powerful predictor of CNS relapse for patients with diffuse large B-cell lymphoma: an international multicenter … TC El-Galaly, D Villa, TY Michaelsen, M Hutchings, NG Mikhaeel, ... European journal of cancer 75, 195-203, 2017 | 93 | 2017 |
| Increased transmissibility of SARS-CoV-2 lineage B. 1.1. 7 by age and viral load FP Lyngse, K Mølbak, RL Skov, LE Christiansen, LH Mortensen, ... Nature Communications 12 (1), 7251, 2021 | 91 | 2021 |
| Mass-immigration determines the assembly of activated sludge microbial communities G Dottorini, TY Michaelsen, S Kucheryavskiy, KS Andersen, ... Proceedings of the National Academy of Sciences 118 (27), e2021589118, 2021 | 60 | 2021 |
| Type III Interferon-Mediated Signaling Is Critical for Controlling Live Attenuated Yellow Fever Virus Infection In Vivo F Douam, YE Soto Albrecht, G Hrebikova, E Sadimin, C Davidson, ... MBio 8 (4), 10.1128/mbio. 00819-17, 2017 | 57 | 2017 |
| Faecal microbiota transplantation from patients with depression or healthy individuals into rats modulates mood-related behaviour JK Knudsen, TY Michaelsen, C Bundgaard-Nielsen, RE Nielsen, ... Scientific reports 11 (1), 21869, 2021 | 48 | 2021 |
| Housefly (Musca domestica L.) associated microbiota across different life stages N de Jonge, TY Michaelsen, R Ejbye-Ernst, A Jensen, ME Nielsen, ... Scientific Reports 10 (1), 7842, 2020 | 40 | 2020 |
| Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read … CM Singleton, F Petriglieri, JM Kristensen, RH Kirkegaard, TY Michaelsen, ... BioRxiv, 2020.05. 12.088096, 2020 | 30 | 2020 |
| Partitioning the metabolic scope: the importance of anaerobic metabolism and implications for the oxygen-and capacity-limited thermal tolerance (OCLTT) hypothesis R Ejbye-Ernst, TY Michaelsen, B Tirsgaard, JM Wilson, LF Jensen, ... Conservation Physiology 4 (1), cow019, 2016 | 29 | 2016 |
| Clinical results and microbiota changes after faecal microbiota transplantation for chronic pouchitis: a pilot study SJ Kousgaard, TY Michaelsen, HL Nielsen, KF Kirk, J Brandt, M Albertsen, ... Scandinavian Journal of Gastroenterology 55 (4), 421-429, 2020 | 27 | 2020 |
| Infection, recovery and re-infection of farmed mink with SARS-CoV-2 TB Rasmussen, J Fonager, CS Jørgensen, R Lassaunière, AS Hammer, ... PLoS pathogens 17 (11), e1010068, 2021 | 26 | 2021 |
| Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing. Nat Commun 12: 2009 CM Singleton, F Petriglieri, JM Kristensen, RH Kirkegaard, TY Michaelsen, ... Handbook of herbs and spices 1, 499-525, 2021 | 23 | 2021 |
| Automated swimming activity monitor for examining temporal patterns of toxicant effects on individual Daphnia magna S Bahrndorff, TY Michaelsen, A Jensen, LF Marcussen, ME Nielsen, ... Journal of Applied Toxicology 36 (7), 896-902, 2016 | 23 | 2016 |
| Introduction and transmission of SARS-CoV-2 lineage B. 1.1. 7, Alpha variant, in Denmark TY Michaelsen, M Bennedbæk, LE Christiansen, MSF Jørgensen, ... Genome medicine 14 (1), 47, 2022 | 22 | 2022 |
| SpikeSeq: A rapid, cost efficient and simple method to identify SARS-CoV-2 variants of concern by Sanger sequencing part of the spike protein gene TS Jørgensen, MS Pedersen, K Blin, F Kuntke, HK Salling, RL Marvig, ... Journal of Virological Methods 312, 114648, 2023 | 19 | 2023 |
| A B-cell–associated gene signature classification of diffuse large B-cell lymphoma by NanoString technology TY Michaelsen, J Richter, RF Brøndum, W Klapper, HE Johnsen, ... Blood advances 2 (13), 1542-1546, 2018 | 16 | 2018 |
| Oxford Nanopore R10. 4 long-read sequencing enables near-perfect bacterial genomes from pure cultures and metagenomes without short-read or reference polishing M Sereika, RH Kirkegaard, SM Karst, TY Michaelsen, EA Sørensen, ... bioRxiv, 0 | 9 | |
