Integrated functional genomic analysis enables annotation of kidney genome-wide association study loci KB Sieber, A Batorsky, K Siebenthall, KL Hudkins, JD Vierstra, S Sullivan, ... Journal of the American Society of Nephrology 30 (3), 421-441, 2019 | 34 | 2019 |
Sensing Host Arginine Is Essential for Leishmania Parasites’ Intracellular Development A Goldman-Pinkovich, S Kannan, R Nitzan-Koren, M Puri, H Pawar, ... MBio 11 (5), 10.1128/mbio. 02023-20, 2020 | 22 | 2020 |
Dynamic colocalization of 2 simultaneously active VSG expression sites within a single expression-site body in Trypanosoma brucei J Budzak, LE Kerry, A Aristodemou, BS Hall, K Witmer, M Kushwaha, ... Proceedings of the National Academy of Sciences 116 (33), 16561-16570, 2019 | 19 | 2019 |
Chromatin-Associated Protein Complexes Link DNA Base J and Transcription Termination in Leishmania BC Jensen, IQ Phan, JR McDonald, A Sur, MA Gillespie, JA Ranish, ... Msphere 6 (1), 10.1128/msphere. 01204-20, 2021 | 17 | 2021 |
Turnover of variant surface glycoprotein in Trypanosoma brucei is a bimodal process P Garrison, U Khan, M Cipriano, PJ Bush, J McDonald, A Sur, PJ Myler, ... Mbio 12 (4), 10.1128/mbio. 01725-21, 2021 | 12 | 2021 |
Euglena International Network (EIN): Driving euglenoid biotechnology for the benefit of a challenged world TGE Ebenezer, RS Low, EC O'Neill, I Huang, A DeSimone, SC Farrow, ... Biology Open 11 (11), bio059561, 2022 | 11 | 2022 |
Sensing host arginine is essential for Leishmania parasites’ intracellular development. mBio 11: e02023–20 A Goldman-Pinkovich, S Kannan, R Nitzan-Koren, M Puri, H Pawar, ... | 9 | 2020 |
A benchmark of Hi-C scaffolders using reference genomes and de novo assemblies A Sur, WS Noble, PJ Myler BioRXiV, 2022.04. 20.488415, 2022 | 5 | 2022 |
RNA-seq analysis reveals differences in transcript abundance between cultured and sand fly-derived Leishmania infantum promastigotes PJ Alcolea, A Alonso, L Baugh, C Paisie, G Ramasamy, A Sekar, A Sur, ... Parasitology international 67 (4), 476-480, 2018 | 5 | 2018 |
Localization of Epigenetic Markers in Leishmania Chromatin JR McDonald, BC Jensen, A Sur, ILK Wong, SM Beverley, PJ Myler Pathogens 11 (8), 930, 2022 | 4 | 2022 |
Immunization with a Trypanosoma cruzi cyclophilin-19 deletion mutant protects against acute Chagas disease in mice BK Jha, S Varikuti, C Verma, R Shivahare, N Bishop, GP Dos Santos, ... npj Vaccines 8 (1), 63, 2023 | 3 | 2023 |
Quantitative RNA analysis using RNA-Seq PJ Myler, JA McDonald, PJ Alcolea, A Sur Leishmania: Methods and Protocols, 95-108, 2019 | 3 | 2019 |
An effective live vaccine strain of Trypanosoma cruzi prevents Chagas disease in the mouse model B Jha, S Varikuti, N Bishop, G dos Santos, J McDonald, A Sur, P Myler, ... | 1 | 2020 |
Edison: measuring scaffolding accuracy with edit distance A Sur, WS Noble, S Sullivan, P Myler bioRxiv, 2022.03. 25.484952, 2022 | | 2022 |
Data Driven Methods for Scaffolding Genomes with Hi-C A Sur University of Washington, 2022 | | 2022 |
Unveiling Elements of Genomic Architecture with Genome Wide Chromatin Conformation Capture. A Sur, J McDonald, B Jensen, WS Noble, PJ Myler AMIA, 2018 | | 2018 |
DNA Aptamers Targeting NF-κB in Environmentally Induced Oxidative Stress A Sur Undergraduate Research Journal, 65, 2012 | | 2012 |
Euglena International Network (EIN): Driving euglenoids into the biotechnology world TGE Ebenezer, RS Low, EC O’Neill, IS Huang, A DeSimone, SC Farrow, ... OSF, 0 | | |