Scientific computing with multicore and accelerators J Kurzak, DA Bader, J Dongarra CRC Press, 2010 | 93 | 2010 |
HipGISAXS: a high-performance computing code for simulating grazing-incidence X-ray scattering data ST Chourou, A Sarje, XS Li, ER Chan, A Hexemer Journal of Applied Crystallography 46 (6), 1781-1795, 2013 | 78 | 2013 |
Bioinformatics: high performance parallel computer architectures B Schmidt CRC Press, 2010 | 63 | 2010 |
Evaluating and optimizing the nersc workload on knights landing T Barnes, B Cook, J Deslippe, D Doerfler, B Friesen, Y He, T Kurth, ... 2016 7th International Workshop on Performance Modeling, Benchmarking and …, 2016 | 47 | 2016 |
Parallel information-theory-based construction of genome-wide gene regulatory networks J Zola, M Aluru, A Sarje, S Aluru Parallel and Distributed Systems, IEEE Transactions on 21 (12), 1721-1733, 2010 | 45 | 2010 |
Parallel genomic alignments on the Cell Broadband Engine A Sarje, S Aluru Parallel and Distributed Systems, IEEE Transactions on 20 (11), 1600-1610, 2009 | 36 | 2009 |
Parallel biological sequence alignments on the cell broadband engine A Sarje, S Aluru Parallel and Distributed Processing, 2008. IPDPS 2008. IEEE International …, 2008 | 30 | 2008 |
Systems and methods for identifying and notifying users of electronic content based on biometric recognition PF Kocks, G Hu, A Sarje US Patent 8,601,076, 2013 | 16 | 2013 |
Massively parallel X-ray scattering simulations A Sarje, XS Li, S Chourou, ER Chan, A Hexemer SC'12: Proceedings of the International Conference on High Performance …, 2012 | 16 | 2012 |
A MapReduce style framework for computations on trees A Sarje, S Aluru 2010 39th International Conference on Parallel Processing, 343-352, 2010 | 16 | 2010 |
High-Performance I/O: HDF5 for Lattice QCD T Kurth, A Pochinsky, A Sarje, S Syritsyn, A Walker-Loud arXiv preprint arXiv:1501.06992, 2015 | 15 | 2015 |
Parallel performance optimizations on unstructured mesh-based simulations A Sarje, S Song, D Jacobsen, K Huck, J Hollingsworth, A Malony, ... Procedia Computer Science 51, 2016-2025, 2015 | 13 | 2015 |
Accelerating Pairwise Computations on Cell Processors A Sarje, J Zola, S Aluru Parallel and Distributed Systems, IEEE Transactions on 22 (1), 69-77, 2011 | 12 | 2011 |
Reinforcement learning of player agents in RoboCup soccer simulation A Sarje, A Chawre, SB Nair Fourth International Conference on Hybrid Intelligent Systems (HIS'04), 480-481, 2004 | 11 | 2004 |
All-pairs computations on many-core graphics processors A Sarje, S Aluru Parallel Computing 39 (2), 79-93, 2013 | 10 | 2013 |
A multi-slice simulation algorithm for grazing-incidence small-angle x-ray scattering SV Venkatakrishnan, J Donatelli, D Kumar, A Sarje, SK Sinha, XS Li, ... Journal of Applied Crystallography 49 (6), 1876-1884, 2016 | 9 | 2016 |
High performance computing systems SA Jarvis, SA Wright, SD Hammond Proceedings of the 4th Internation Performance Modeling, Benchmarking, and …, 2013 | 8 | 2013 |
Proc. Sci. T Kurth, A Pochinsky, A Sarje, S Syritsyn, A Walker-Loud | 7 | 2010 |
Constructing gene regulatory networks on clusters of Cell processors J Zola, A Sarje, S Aluru Parallel Processing, 2009. ICPP'09. International Conference on, 108-115, 2009 | 7 | 2009 |
A MapReduce style framework for trees A Sarje, S Aluru Electrical and Computer Engineering, Iowa State University, Tech. Rep., June, 2009 | 5 | 2009 |