| ONCOMINE: a cancer microarray database and integrated data-mining platform DR Rhodes, J Yu, K Shanker, N Deshpande, R Varambally, D Ghosh, ... Neoplasia 6 (1), 1-6, 2004 | 3875 | 2004 |
| Development of human protein reference database as an initial platform for approaching systems biology in humans S Peri, JD Navarro, R Amanchy, TZ Kristiansen, CK Jonnalagadda, ... Genome research 13 (10), 2363-2371, 2003 | 1331 | 2003 |
| Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression DR Rhodes, J Yu, K Shanker, N Deshpande, R Varambally, D Ghosh, ... Proceedings of the National Academy of Sciences 101 (25), 9309-9314, 2004 | 1152 | 2004 |
| Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma CP Kubicek, A Herrera-Estrella, V Seidl-Seiboth, DA Martinez, ... Genome biology 12, 1-15, 2011 | 769 | 2011 |
| Human protein reference database—2006 update GR Mishra, M Suresh, K Kumaran, N Kannabiran, S Suresh, P Bala, ... Nucleic acids research 34 (suppl_1), D411-D414, 2006 | 733 | 2006 |
| Human protein reference database as a discovery resource for proteomics S Peri, JD Navarro, TZ Kristiansen, R Amanchy, V Surendranath, ... Nucleic acids research 32 (suppl_1), D497-D501, 2004 | 705 | 2004 |
| Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets TKB Gandhi, J Zhong, S Mathivanan, L Karthick, KN Chandrika, ... Nature genetics 38 (3), 285-293, 2006 | 558 | 2006 |
| Specific bacteria and metabolites associated with response to fecal microbiota transplantation in patients with ulcerative colitis S Paramsothy, S Nielsen, MA Kamm, NP Deshpande, JJ Faith, ... Gastroenterology 156 (5), 1440-1454. e2, 2019 | 395 | 2019 |
| Protein glycosylation pathways in filamentous fungi N Deshpande, MR Wilkins, N Packer, H Nevalainen Glycobiology 18 (8), 626-637, 2008 | 213 | 2008 |
| Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E SA Waters, SP McAteer, G Kudla, I Pang, NP Deshpande, TG Amos, ... The EMBO journal 36 (3), 374-387, 2017 | 176 | 2017 |
| Plasma Proteome Database as a resource for proteomics research B Muthusamy, G Hanumanthu, S Suresh, B Rekha, D Srinivas, L Karthick, ... Proteomics 5 (13), 3531-3536, 2005 | 172 | 2005 |
| Signatures within the esophageal microbiome are associated with host genetics, age, and disease NP Deshpande, SM Riordan, N Castaño-Rodríguez, MR Wilkins, ... Microbiome 6, 1-14, 2018 | 128 | 2018 |
| Integrative genomics identifies the molecular basis of resistance to azacitidine therapy in myelodysplastic syndromes A Unnikrishnan, E Papaemmanuil, D Beck, NP Deshpande, A Verma, ... Cell reports 20 (3), 572-585, 2017 | 117 | 2017 |
| GlycoSpectrumScan: fishing glycopeptides from MS spectra of protease digests of human colostrum sIgA N Deshpande, PH Jensen, NH Packer, D Kolarich Journal of proteome research 9 (2), 1063-1075, 2010 | 111 | 2010 |
| The RNA Atlas expands the catalog of human non-coding RNAs L Lorenzi, HS Chiu, F Avila Cobos, S Gross, PJ Volders, R Cannoodt, ... Nature biotechnology 39 (11), 1453-1465, 2021 | 107 | 2021 |
| A proteomic analysis of salivary glands of female Anopheles gambiae mosquito DE Kalume, M Okulate, J Zhong, R Reddy, S Suresh, N Deshpande, ... Proteomics 5 (14), 3765-3777, 2005 | 89 | 2005 |
| The pathogenic potential of Campylobacter concisus strains associated with chronic intestinal diseases NO Kaakoush, NP Deshpande, MR Wilkins, CG Tan, JA Burgos-Portugal, ... PloS one 6 (12), e29045, 2011 | 84 | 2011 |
| ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform SH Nagaraj, N Deshpande, RB Gasser, S Ranganathan Nucleic Acids Research 35 (suppl_2), W143-W147, 2007 | 83 | 2007 |
| Transcriptomic and proteomic analyses reveal key innate immune signatures in the host response to the gastrointestinal pathogen Campylobacter concisus NO Kaakoush, NP Deshpande, SM Man, JA Burgos-Portugal, FA Khattak, ... Infection and immunity 83 (2), 832-845, 2015 | 64 | 2015 |
| The draft genome of the pest tephritid fruit fly Bactrocera tryoni: resources for the genomic analysis of hybridising species AS Gilchrist, DCA Shearman, M Frommer, KA Raphael, NP Deshpande, ... BMC genomics 15, 1-17, 2014 | 52 | 2014 |
