Automated encoding of clinical documents based on natural language processing C Friedman, L Shagina, Y Lussier, G Hripcsak Journal of the American Medical Informatics Association 11 (5), 392-402, 2004 | 630 | 2004 |
Panmicrobial oligonucleotide array for diagnosis of infectious diseases G Palacios, PL Quan, OJ Jabado, S Conlan, DL Hirschberg, Y Liu, J Zhai, ... Emerging infectious diseases 13 (1), 73, 2007 | 364 | 2007 |
MicroRNA expression characterizes oligometastasis (es) YA Lussier, HR Xing, JK Salama, NN Khodarev, Y Huang, Q Zhang, ... PloS one 6 (12), e28650, 2011 | 276 | 2011 |
Peripheral blood mononuclear cell gene expression profiles predict poor outcome in idiopathic pulmonary fibrosis JD Herazo-Maya, I Noth, SR Duncan, SH Kim, SF Ma, GC Tseng, ... Science translational medicine 5 (205), 205ra136-205ra136, 2013 | 257 | 2013 |
Oligo-and polymetastatic progression in lung metastasis (es) patients is associated with specific microRNAs YA Lussier, NN Khodarev, K Regan, K Corbin, H Li, S Ganai, SA Khan, ... PloS one 7 (12), e50141, 2012 | 200 | 2012 |
Up-regulation of a HOXA-PBX3 homeobox-gene signature following down-regulation of miR-181 is associated with adverse prognosis in patients with … Z Li, H Huang, Y Li, X Jiang, P Chen, S Arnovitz, MD Radmacher, ... Blood, The Journal of the American Society of Hematology 119 (10), 2314-2324, 2012 | 194 | 2012 |
Information theory applied to the sparse gene ontology annotation network to predict novel gene function Y Tao, L Sam, J Li, C Friedman, YA Lussier Bioinformatics 23 (13), i529-i538, 2007 | 189 | 2007 |
System and method for generating an amalgamated database Y Lussier, I Sarkar, M Cantor US Patent App. 11/120,715, 2006 | 185 | 2006 |
Network modeling identifies molecular functions targeted by miR-204 to suppress head and neck tumor metastasis Y Lee, X Yang, Y Huang, H Fan, Q Zhang, Y Wu, J Li, R Hasina, C Cheng, ... PLoS computational biology 6 (4), e1000730, 2010 | 173 | 2010 |
Essential role of pre–B-cell colony enhancing factor in ventilator-induced lung injury SB Hong, Y Huang, L Moreno-Vinasco, S Sammani, J Moitra, JW Barnard, ... American journal of respiratory and critical care medicine 178 (6), 605-617, 2008 | 149 | 2008 |
Disambiguating ambiguous biomedical terms in biomedical narrative text: an unsupervised method H Liu, YA Lussier, C Friedman Journal of biomedical informatics 34 (4), 249-261, 2001 | 139 | 2001 |
Genomic assessment of a multikinase inhibitor, sorafenib, in a rodent model of pulmonary hypertension L Moreno-Vinasco, M Gomberg-Maitland, ML Maitland, AA Desai, ... Physiological genomics 33 (2), 278-291, 2008 | 135 | 2008 |
Microbes are associated with host innate immune response in idiopathic pulmonary fibrosis Y Huang, SF Ma, MS Espindola, R Vij, JM Oldham, GB Huffnagle, ... American journal of respiratory and critical care medicine 196 (2), 208-219, 2017 | 120 | 2017 |
A study of abbreviations in the UMLS. H Liu, YA Lussier, C Friedman Proceedings of the AMIA Symposium, 393, 2001 | 100 | 2001 |
PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing Y Lussier, T Borlawsky, D Rappaport, Y Liu, C Friedman Biocomputing 2006, 64-75, 2006 | 94 | 2006 |
Chronic intestinal inflammation induces stress-response genes in commensal Escherichia coli LG Patwa, TJ Fan, S Tchaptchet, Y Liu, YA Lussier, RB Sartor, JJ Hansen Gastroenterology 141 (5), 1842-1851. e10, 2011 | 88 | 2011 |
The emergence of genome-based drug repositioning YA Lussier, JL Chen Science translational medicine 3 (96), 96ps35-96ps35, 2011 | 88 | 2011 |
Exprtarget: an integrative approach to predicting human microRNA targets ER Gamazon, HK Im, S Duan, YA Lussier, NJ Cox, ME Dolan, W Zhang PloS one 5 (10), e13534, 2010 | 88 | 2010 |
Deregulation of a Hox protein regulatory network spanning prostate cancer initiation and progression JL Chen, J Li, KJ Kiriluk, AM Rosen, GP Paner, T Antic, YA Lussier, ... Clinical Cancer Research 18 (16), 4291-4302, 2012 | 82 | 2012 |
Translational bioinformatics: linking knowledge across biological and clinical realms IN Sarkar, AJ Butte, YA Lussier, P Tarczy-Hornoch, L Ohno-Machado Journal of the American Medical Informatics Association 18 (4), 354-357, 2011 | 76 | 2011 |