| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1826* | 2020 |
| Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 538 | 2020 |
| Pathway and network analysis of more than 2500 whole cancer genomes MA Reyna, D Haan, M Paczkowska, LPC Verbeke, M Vazquez, ... Nature communications 11 (1), 729, 2020 | 102 | 2020 |
| Identification of cancer drivers at CTCF insulators in 1,962 whole genomes EM Liu, A Martinez-Fundichely, BJ Diaz, B Aronson, T Cuykendall, ... Cell systems 8 (5), 446-455. e8, 2019 | 70 | 2019 |
| Bhageerath-H: A homology/ab initio hybrid server for predicting tertiary structures of monomeric soluble proteins B Jayaram, P Dhingra, A Mishra, R Kaushik, G Mukherjee, A Singh, ... BMC bioinformatics 15, 1-12, 2014 | 58 | 2014 |
| Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes E Rheinbay, MM Nielsen, F Abascal, G Tiao, H Hornshøj, JM Hess, ... BioRxiv, 237313, 2017 | 47 | 2017 |
| Bhageerath—Targeting the near impossible: Pushing the frontiers of atomic models for protein tertiary structure prediction# B Jayaram, P Dhingra, B Lakhani, S Shekhar Journal of Chemical Sciences 124, 83-91, 2012 | 36 | 2012 |
| Identification of novel prostate cancer drivers using RegNetDriver: a framework for integration of genetic and epigenetic alterations with tissue-specific regulatory network P Dhingra, A Martinez-Fundichely, A Berger, FW Huang, AN Forbes, ... Genome biology 18, 1-23, 2017 | 34 | 2017 |
| Inherited determinants of early recurrent somatic mutations in prostate cancer A Romanel, S Garritano, B Stringa, M Blattner, D Dalfovo, D Chakravarty, ... Nature communications 8 (1), 48, 2017 | 34 | 2017 |
| PCAWG Drivers and Functional Interpretation Working Group. PCAWG Structural Variation Working Group. PCAWG Consortium Analyses of non-coding somatic drivers in 2,658 cancer … E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 31 | 2020 |
| A homology/ab initio hybrid algorithm for sampling near‐native protein conformations P Dhingra, B Jayaram Journal of computational chemistry 34 (22), 1925-1936, 2013 | 21 | 2013 |
| Bio-informatics for better tomorrow B Jayaram, P Dhingra Supercomputing Facility for Bio-informatics and Computational Biology …, 2010 | 21 | 2010 |
| Using FunSeq2 for Coding and Non‐Coding Variant Annotation and Prioritization P Dhingra, Y Fu, M Gerstein, E Khurana Current Protocols in Bioinformatics 57 (1), 15.11. 1-15.11. 17, 2017 | 8 | 2017 |
| A novel oral formulation of the melanocortin-1 receptor agonist PL8177 resolves inflammation in preclinical studies of inflammatory bowel disease and is gut restricted in rats … J Dodd, R Jordan, M Makhlina, K Barnett, A Roffel, C Spana, A Obr, ... Frontiers in immunology 14, 1083333, 2023 | 7 | 2023 |
| Towards creating complete proteomic structural databases of whole organisms B Jayaram, P Dhingra Current Bioinformatics 7 (4), 424-435, 2012 | 7 | 2012 |
| Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... nature genetics 55 (6), 1076-1076, 2023 | 2 | 2023 |
| Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 614 (7948), E40-E40, 2023 | 2 | 2023 |
| Development and validation of AI/ML derived splice-switching oligonucleotides AD Fronk, MA Manzanares, P Zheng, A Geier, K Anderson, S Stanton, ... Molecular Systems Biology, 1-26, 2024 | 1 | 2024 |
| Author Correction: Pan-cancer analysis of whole genomes Nature 614 (7948), E39-E39, 2023 | 1 | 2023 |
| 107 Genomes to hit molecules In Silico: a country path today, a highway tomorrow: a case study of Chikungunya A Soni, P Dhingra, A Mishra, T Singh, G Mukherjee, B Jayaram Journal of Biomolecular Structure and Dynamics 31 (sup1), 67-68, 2013 | 1 | 2013 |
