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Regenerative lineages and immune-mediated pruning in lung cancer metastasis AM Laughney, J Hu, NR Campbell, SF Bakhoum, M Setty, VP Lavallee, ... 🌱👓Nature medicine 26 (2), 259-269, 2020 | 334 | 2020 |
Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer JM Chan*, Á Quintanal-Villalonga*, VR Gao*, Y Xie*, V Allaj, ... 🌱✨Cancer Cell 39 (11), 1479-1496. e18, 2021 | 235 | 2021 |
Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis C Burdziak, D Alonso-Curbelo, T Walle, J Reyes, FM Barriga, D Haviv, ... 🌱Science 380 (6645), eadd5327, 2023 | 65 | 2023 |
Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis Y Zhang, CJ Harris, Q Liu, W Liu, I Ausin, Y Long, L Xiao, L Feng, X Chen, ... Proceedings of the National Academy of Sciences 115 (5), E1069-E1074, 2018 | 58 | 2018 |
MITI minimum information guidelines for highly multiplexed tissue images D Schapiro, C Yapp, A Sokolov, SM Reynolds, YA Chen, D Sudar, Y Xie, ... 🌱Nature methods 19 (3), 262-267, 2022 | 47 | 2022 |
Pharmacological regulation of in situ tissue stem cells differentiation for soft tissue calcification treatment JJ Hu, Z Yin, WL Shen, YB Xie, T Zhu, P Lu, YZ Cai, MJ Kong, BC Heng, ... Stem Cells 34 (4), 1083-1096, 2016 | 31 | 2016 |
Controlled-release curcumin attenuates progression of tendon ectopic calcification by regulating the differentiation of tendon stem/progenitor cells Y Chen*, Y Xie*, M Liu, J Hu, C Tang, J Huang, T Qin, X Chen, W Chen, ... Materials Science and Engineering: C 103, 109711, 2019 | 22 | 2019 |
Progressive plasticity during colorectal cancer metastasis AR Moorman, F Cambuli, EK Benitez, Q Jiang, Y Xie, A Mahmoud, ... bioRxiv, 2023.08. 18.553925, 2023 | 12 | 2023 |
Protocol to dissociate, process, and analyze the human lung tissue using single-cell RNA-seq Á Quintanal-Villalonga, JM Chan, I Masilionis, VR Gao, Y Xie, V Allaj, ... STAR protocols 3 (4), 101776, 2022 | 5 | 2022 |
Automatic Optic Disc/Cup Segmentation and Glaucoma Classification and Fovea Localization X Bian*, Y Huang*, X Li*, X Niu*, J Wu*, Y Xie* 🤖✨Refuge reports, 2020 | 4 | 2020 |
Cross-platform dataset of multiplex fluorescent cellular object image annotations N Aleynick, Y Li, Y Xie, M Zhang, A Posner, L Roshal, D Pe’er, ... 🌱🤖👓Scientific Data 10 (1), 193, 2023 | 3 | 2023 |
A Bayesian method for rare variant analysis using functional annotations and its application to Autism S Han, N Knoblauch, G Wang, S Zhao, Y Liu, Y Xie, W Sheng, HT Nguyen, ... bioRxiv, 828061, 2019 | 3 | 2019 |
Counterfactual hypothesis testing of tumor microenvironment scenarios through semantic image synthesis D Li, Q Ma, J Chen, A Liu, J Cheung, Y Xie, H Gudjonson, T Nawy, ... 🌱🤖✨bioRxiv, 2020.10. 27.358101, 2020 | 2 | 2020 |
Addressing persistent challenges in digital image analysis of cancerous tissues S Prabhakaran, C Yapp, GJ Baker, J Beyer, YH Chang, AL Creason, ... bioRxiv, 2023 | 1 | 2023 |
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The neuroendocrine transition in prostate cancer is dynamic and dependent on ASCL1 R Romero, T Chu, TJ González-Robles, P Smith, Y Xie, H Kaur, S Yoder, ... bioRxiv, 2024 | | 2024 |
Abstract NG05: Multi-omic approaches to study the role of plasticity in therapy resistance and metastasis in lung cancer A Quintanal-Villalonga, JM Chan, VR Gao, Y Xie, D Pe’er, CM Rudin Cancer Research 83 (7_Supplement), NG05-NG05, 2023 | | 2023 |
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