Building digital twins of the human immune system: toward a roadmap R Laubenbacher, A Niarakis, T Helikar, G An, B Shapiro, RS Malik-Sheriff, ... NPJ digital medicine 5 (1), 64, 2022 | 64 | 2022 |
A modular computational framework for medical digital twins J Masison, J Beezley, Y Mei, HAL Ribeiro, AC Knapp, L Sordo Vieira, ... Proceedings of the National Academy of Sciences 118 (20), e2024287118, 2021 | 56 | 2021 |
Anyons from three-body hard-core interactions in one dimension NL Harshman, AC Knapp Annals of Physics 412, 168003, 2020 | 31 | 2020 |
Topological exchange statistics in one dimension NL Harshman, AC Knapp Physical Review A 105 (5), 052214, 2022 | 10 | 2022 |
Multi-scale mechanistic modelling of the host defence in invasive aspergillosis reveals leucocyte activation and iron acquisition as drivers of infection outcome HAL Ribeiro, LS Vieira, Y Scindia, B Adhikari, M Wheeler, A Knapp, ... Journal of The Royal Society Interface 19 (189), 20210806, 2022 | 10 | 2022 |
Computational modeling of macrophage iron sequestration during host defense against Aspergillus B Adhikari, Y Scindia, L Sordo Vieira, H de Assis Lopes Ribeiro, ... Msphere 7 (4), e00074-22, 2022 | 4 | 2022 |
Building digital twins of the human immune system: toward a roadmap. npj Digital Medicine 5 R Laubenbacher, A Niarakis, T Helikar, G An, B Shapiro, RS Malik-Sheriff, ... | 4 | 2022 |
Coincidence Structures and Hard-Core Few-Body Interactions NL Harshman, AC Knapp Few-Body Systems 59, 1-7, 2018 | 3 | 2018 |
SteadyCellPhenotype: a web-based tool for the modeling of biological networks with ternary logic AC Knapp, L Sordo Vieira, R Laubenbacher, J Chifman Bioinformatics 38 (8), 2369-2370, 2022 | 2 | 2022 |
Symplectic structures on the cotangent bundles of open 4-manifolds AC Knapp International Mathematics Research Notices 2014 (22), 6233-6241, 2014 | 2 | 2014 |
Lagrangian tori in closed 4-manifolds AC Knapp Journal of Topology 3 (2), 333-342, 2010 | 2 | 2010 |
EFECT--A Method and Metric to Assess the Reproducibility of Stochastic Simulation Studies TJ Sego, M König, LL Fonseca, B Fain, AC Knapp, K Tiwari, H Hermjakob, ... arXiv preprint arXiv:2406.16820, 2024 | | 2024 |
Beyond braid statistics: Constructing a lattice model for anyons with exchange statistics intrinsic to one dimension S Nagies, B Wang, AC Knapp, A Eckardt, NL Harshman SciPost Physics 16 (3), 086, 2024 | | 2024 |
Ensemble Kalman filter methods for agent-based medical digital twins AC Knapp, DA Cruz, B Mehrad, RC Laubenbacher bioRxiv, 2024.05. 31.596692, 2024 | | 2024 |
Cyclone: open-source package for simulation and analysis of finite dynamical systems ES Dimitrova, AC Knapp, B Stigler, ME Stillman Bioinformatics 39 (11), btad634, 2023 | | 2023 |
Beyond braid anyons: A lattice model for one-dimensional anyons with a Galilean invariant continuum limit S Nagies, B Wang, AC Knapp, A Eckardt, NL Harshman arXiv preprint arXiv:2309.04358, 2023 | | 2023 |
Simulating traid anyons with bosons hopping on a lattice N Harshman, S Nagies, B Wang, A Knapp, A Eckardt APS March Meeting Abstracts 2023, M66. 005, 2023 | | 2023 |
Structure and Statistics of the Traid Group F Ark, N Harshman, A Knapp APS March Meeting Abstracts 2022, G00. 327, 2022 | | 2022 |
The Innate Immune Response to Invasive Pulmonary Aspergillosis: A Systems Modeling Approach HAL Ribeiro, LS Vieira, Y Scindia, B Adhikari, M Wheeler, A Knapp, ... bioRxiv, 2021.06. 08.447590, 2021 | | 2021 |
A continuum path integral approach to the simulation of a unitary gas AC Knapp University of Illinois at Urbana-Champaign, 2015 | | 2015 |