Ensembl 2007 TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ... Nucleic acids research 35 (suppl_1), D610-D617, 2007 | 1557 | 2007 |
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ... Nucleic acids research 47 (D1), D464-D474, 2019 | 1068 | 2019 |
The RCSB protein data bank: integrative view of protein, gene and 3D structural information PW Rose, A Prlić, A Altunkaya, C Bi, AR Bradley, CH Christie, ... Nucleic acids research, gkw1000, 2016 | 1058 | 2016 |
The RCSB Protein Data Bank: redesigned web site and web services PW Rose, B Beran, C Bi, WF Bluhm, D Dimitropoulos, DS Goodsell, ... Nucleic acids research 39 (suppl_1), D392-D401, 2010 | 711 | 2010 |
Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272-281, 2018 | 646 | 2018 |
Ensembl 2008 P Flicek, I Ahmed, MR Amode, D Barrell, K Beal, S Brent, ... Nucleic acids research, gks1236, 2012 | 622* | 2012 |
Web-based molecular graphics for large complexes AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose Proceedings of the 21st international conference on Web3D technology, 185-186, 2016 | 618 | 2016 |
The RCSB Protein Data Bank: views of structural biology for basic and applied research and education PW Rose, A Prlić, C Bi, WF Bluhm, CH Christie, S Dutta, RK Green, ... Nucleic acids research 43 (D1), D345-D356, 2015 | 576 | 2015 |
The RCSB Protein Data Bank: new resources for research and education PW Rose, C Bi, WF Bluhm, CH Christie, D Dimitropoulos, S Dutta, ... Nucleic acids research 41 (D1), D475-D482, 2012 | 535 | 2012 |
Ensembl 2006 E Birney, D Andrews, P Bevan, M Caccamo, G Cameron, Y Chen, ... D468 D470, 2004 | 488 | 2004 |
BioJava: an open-source framework for bioinformatics RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ... Bioinformatics 24 (18), 2096-2097, 2008 | 300 | 2008 |
Pre-calculated protein structure alignments at the RCSB PDB website A Prlić, S Bliven, PW Rose, WF Bluhm, C Bizon, A Godzik, PE Bourne Bioinformatics 26 (23), 2983-2985, 2010 | 243 | 2010 |
BioJava: an open-source framework for bioinformatics in 2012 A Prlić, A Yates, SE Bliven, PW Rose, J Jacobsen, PV Troshin, ... Bioinformatics 28 (20), 2693-2695, 2012 | 221 | 2012 |
Ten simple rules for the open development of scientific software A Prlić, JB Procter PLoS computational biology 8 (12), e1002802, 2012 | 165 | 2012 |
GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021 | 150 | 2021 |
Structure-derived substitution matrices for alignment of distantly related sequences A Prlić, FS Domingues, MJ Sippl Protein Engineering 13 (8), 545-550, 2000 | 130 | 2000 |
Integrating biological data–the distributed annotation system AM Jenkinson, M Albrecht, E Birney, H Blankenburg, T Down, RD Finn, ... BMC bioinformatics 9, 1-7, 2008 | 118 | 2008 |
SISYPHUS—structural alignments for proteins with non-trivial relationships A Andreeva, A Prlić, TJP Hubbard, AG Murzin Nucleic acids research 35 (suppl_1), D253-D259, 2007 | 100 | 2007 |
Impact of genetic variation on three dimensional structure and function of proteins R Bhattacharya, PW Rose, SK Burley, A Prlić PloS one 12 (3), e0171355, 2017 | 92 | 2017 |
Trendspotting in the Protein Data Bank. H Berman, CN Buvaneswari, DC Luigi, D Shuchismita, G Sutapa, ... FEBS letters, 2013 | 92 | 2013 |