Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1827* | 2020 |
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 920 | 2020 |
Colorectal cancer cells enter a diapause-like DTP state to survive chemotherapy SK Rehman, J Haynes, E Collignon, KR Brown, Y Wang, AML Nixon, ... Cell 184 (1), 226-242. e21, 2021 | 325 | 2021 |
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254. e39, 2021 | 322 | 2021 |
The evolutionary landscape of localized prostate cancers drives clinical aggression SMG Espiritu, LY Liu, Y Rubanova, V Bhandari, EM Holgersen, LM Szyca, ... Cell 173 (4), 1003-1013. e15, 2018 | 236 | 2018 |
A practical guide to cancer subclonal reconstruction from DNA sequencing M Tarabichi, A Salcedo, AG Deshwar, M Ni Leathlobhair, J Wintersinger, ... Nature methods 18 (2), 144-155, 2021 | 137 | 2021 |
Relapse-fated latent diagnosis subclones in acute B lineage leukemia are drug tolerant and possess distinct metabolic programs SM Dobson, L García-Prat, RJ Vanner, J Wintersinger, E Waanders, Z Gu, ... Cancer discovery 10 (4), 568-587, 2020 | 95 | 2020 |
Kablammo: an interactive, web-based BLAST results visualizer JA Wintersinger, JD Wasmuth Bioinformatics 31 (8), 1305-1306, 2015 | 73 | 2015 |
A community effort to create standards for evaluating tumor subclonal reconstruction A Salcedo, M Tarabichi, SMG Espiritu, AG Deshwar, M David, NM Wilson, ... Nature biotechnology 38 (1), 97-107, 2020 | 72* | 2020 |
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig Y Rubanova, R Shi, CF Harrigan, R Li, J Wintersinger, N Sahin, ... Nature communications 11 (1), 731, 2020 | 55* | 2020 |
Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... BioRxiv, 312041, 2018 | 52* | 2018 |
PCAWG Evolution and Heterogeneity Working Group and the PCAWG Consortium. Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-54, 2021 | 28 | 2021 |
Reconstructing complex cancer evolutionary histories from multiple bulk DNA samples using Pairtree JA Wintersinger, SM Dobson, E Kulman, LD Stein, JE Dick, Q Morris Blood Cancer Discovery 3 (3), 208-219, 2022 | 16 | 2022 |
Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine LK Sundermann, J Wintersinger, G Rätsch, J Stoye, Q Morris PLoS computational biology 17 (1), e1008400, 2021 | 15 | 2021 |
Relapse-fated latent diagnosis subclones in acute B lineage leukemia are drug tolerant and possess distinct metabolic programs. Cancer Discov. 2020; 10: 568–587. doi: 10.1158 … SM Dobson, L García-Prat, RJ Vanner, J Wintersinger, E Waanders, Z Gu, ... CD-19-1059.[Europe PMC free article][Abstract][CrossRef][Google Scholar], 0 | 14 | |
Multiomic profiling of central nervous system leukemia identifies mRNA translation as a therapeutic target RJ Vanner, SM Dobson, OI Gan, J McLeod, EM Schoof, I Grandal, ... Blood cancer discovery 3 (1), 16-31, 2022 | 5 | 2022 |
Reconstructing cancer phylogenies using Pairtree, a clone tree reconstruction algorithm E Kulman, J Wintersinger, Q Morris STAR protocols 3 (4), 101706, 2022 | 3 | 2022 |
Pairtree: fast reconstruction of cancer evolutionary history using pairwise mutation relationships J Wintersinger, S Dobson, J Dick, Q Morris bioRxiv, 372219, 2020 | 3 | 2020 |
One species, two genomes: A critical assessment of inter-isolate variation and identification of assembly incongruence in Haemonchus contortus JA Wintersinger, GM Mariene, JD Wasmuth bioRxiv, 384008, 2018 | 3 | 2018 |
Author Correction: The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 614 (7948), E42-E42, 2023 | 2 | 2023 |