| Identification of novel and candidate miRNAs in rice by high throughput sequencing R Sunkar, X Zhou, Y Zheng, W Zhang, JK Zhu BMC plant biology 8, 1-17, 2008 | 535 | 2008 |
| Transcriptome‐wide identification of microRNA targets in rice YF Li, Y Zheng, C Addo‐Quaye, L Zhang, A Saini, G Jagadeeswaran, ... The Plant Journal 62 (5), 742-759, 2010 | 423 | 2010 |
| Distributed stochastic search and distributed breakout: properties, comparison and applications to constraint optimization problems in sensor networks W Zhang, G Wang, Z Xing, L Wittenburg Artificial Intelligence 161 (1-2), 55-87, 2005 | 413 | 2005 |
| Characterization and identification of microRNA core promoters in four model species X Zhou, J Ruan, G Wang, W Zhang PLoS computational biology 3 (3), e37, 2007 | 403 | 2007 |
| Identification of cold-inducible microRNAs in plants by transcriptome analysis X Zhou, G Wang, K Sutoh, JK Zhu, W Zhang Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1779 (11 …, 2008 | 378 | 2008 |
| Genetic control of human brain transcript expression in Alzheimer disease JA Webster, JR Gibbs, J Clarke, M Ray, W Zhang, P Holmans, K Rohrer, ... The American Journal of Human Genetics 84 (4), 445-458, 2009 | 353 | 2009 |
| A survey of community detection approaches: From statistical modeling to deep learning D Jin, Z Yu, P Jiao, S Pan, D He, J Wu, SY Philip, W Zhang IEEE Transactions on Knowledge and Data Engineering 35 (2), 1149-1170, 2021 | 311 | 2021 |
| UV‐B responsive microRNA genes in Arabidopsis thaliana X Zhou, G Wang, W Zhang Molecular systems biology 3 (1), 103, 2007 | 306 | 2007 |
| Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks W Zhang, S Gao, X Zhou, P Chellappan, Z Chen, X Zhou, X Zhang, ... Plant molecular biology 75, 93-105, 2011 | 302 | 2011 |
| Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome CE Joyce, X Zhou, J Xia, C Ryan, B Thrash, A Menter, W Zhang, ... Human molecular genetics 20 (20), 4025-4040, 2011 | 297 | 2011 |
| An iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots J Ruan, GD Stormo, W Zhang Bioinformatics 20 (1), 58-66, 2004 | 295 | 2004 |
| Cassava genome from a wild ancestor to cultivated varieties W Wang, B Feng, J Xiao, Z Xia, X Zhou, P Li, W Zhang, Y Wang, BL Møller, ... Nature communications 5 (1), 5110, 2014 | 279 | 2014 |
| A general co-expression network-based approach to gene expression analysis: comparison and applications J Ruan, AK Dean, W Zhang BMC systems biology 4, 1-21, 2010 | 271 | 2010 |
| Modularity based community detection with deep learning. L Yang, X Cao, D He, C Wang, X Wang, W Zhang IJCAI 16 (2016), 2252-2258, 2016 | 264 | 2016 |
| Identifying network communities with a high resolution J Ruan, W Zhang Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 77 (1 …, 2008 | 241 | 2008 |
| Semantic community identification in large attribute networks X Wang, D Jin, X Cao, L Yang, W Zhang Proceedings of the AAAI conference on artificial intelligence 30 (1), 2016 | 228 | 2016 |
| The asymmetric traveling salesman problem: Algorithms, instance generators, and tests J Cirasella, DS Johnson, LA McGeoch, W Zhang Workshop on algorithm engineering and experimentation, 32-59, 2001 | 220 | 2001 |
| Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development G Jagadeeswaran, Y Zheng, N Sumathipala, H Jiang, EL Arrese, ... BMC genomics 11, 1-18, 2010 | 213 | 2010 |
| siRNAs from miRNA sites mediate DNA methylation of target genes P Chellappan, J Xia, X Zhou, S Gao, X Zhang, G Coutino, F Vazquez, ... Nucleic acids research 38 (20), 6883-6894, 2010 | 208 | 2010 |
| Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana W Zhang, J Ruan, TD Ho, Y You, T Yu, RS Quatrano Bioinformatics 21 (14), 3074-3081, 2005 | 203 | 2005 |
