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Zilu Zhou
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The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
4132020
Opposing functions of interferon coordinate adaptive and innate immune responses to cancer immune checkpoint blockade
JL Benci, LR Johnson, R Choa, Y Xu, J Qiu, Z Zhou, B Xu, D Ye, ...
Cell 178 (4), 933-948. e14, 2019
3752019
Data denoising with transfer learning in single-cell transcriptomics
J Wang, D Agarwal, M Huang, G Hu, Z Zhou, C Ye, NR Zhang
Nature methods 16 (9), 875-878, 2019
1742019
XWAS: a software toolset for genetic data analysis and association studies of the X chromosome
F Gao, D Chang, A Biddanda, L Ma, Y Guo, Z Zhou, A Keinan
Journal of Heredity 106 (5), 666-671, 2015
1192015
Surface protein imputation from single cell transcriptomes by deep neural networks
Z Zhou, C Ye, J Wang, NR Zhang
Nature communications 11 (1), 651, 2020
702020
Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts
A Sathe, K Mason, SM Grimes, Z Zhou, BT Lau, X Bai, A Su, X Tan, ...
Clinical Cancer Research 29 (1), 244-260, 2023
572023
DENDRO: genetic heterogeneity profiling and subclone detection by single-cell RNA sequencing
Z Zhou, B Xu, A Minn, NR Zhang
Genome biology 21, 1-15, 2020
502020
Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny
E Urrutia, H Chen, Z Zhou, NR Zhang, Y Jiang
Bioinformatics 34 (12), 2126-2128, 2018
382018
Myeloid cell hypoxia-inducible factors promote resolution of inflammation in experimental colitis
N Lin, JES Shay, H Xie, DSM Lee, N Skuli, Q Tang, Z Zhou, A Azzam, ...
Frontiers in immunology 9, 2565, 2018
322018
Integrative DNA copy number detection and genotyping from sequencing and array-based platforms
Z Zhou, W Wang, LS Wang, NR Zhang
Bioinformatics 34 (14), 2349-2355, 2018
132018
Statistical Methods for Multi-Omics Inference from Single Cell Transcriptome
Z Zhou
University of Pennsylvania, 2020
2020
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