The PRIDE database and related tools and resources in 2019: improving support for quantification data Y Perez-Riverol, A Csordas, J Bai, M Bernal-Llinares, S Hewapathirana, ... Nucleic acids research 47 (D1), D442-D450, 2019 | 6312 | 2019 |
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ... Nucleic acids research, gkw936, 2016 | 864 | 2016 |
The next-generation Open Targets Platform: reimagined, redesigned, rebuilt D Ochoa, A Hercules, M Carmona, D Suveges, J Baker, C Malangone, ... Nucleic acids research 51 (D1), D1353-D1359, 2023 | 133 | 2023 |
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D SA Kennedy, MA Jarboui, S Srihari, C Raso, K Bryan, L Dernayka, ... Nature communications 11 (1), 499, 2020 | 52 | 2020 |
Contextual Hub Analysis Tool (CHAT): A Cytoscape app for identifying contextually relevant hubs in biological networks T Muetze, IH Goenawan, HL Wiencko, M Bernal-Llinares, K Bryan, ... F1000Research 5, 2016 | 37 | 2016 |
HiQuant: rapid postquantification analysis of large-scale MS-generated proteomics data K Bryan, MA Jarboui, C Raso, M Bernal-Llinares, B McCann, J Rauch, ... Journal of Proteome Research 15 (6), 2072-2079, 2016 | 10 | 2016 |
Identifiers. org: Compact Identifier services in the cloud M Bernal-Llinares, J Ferrer-Gómez, N Juty, C Goble, SM Wimalaratne, ... Bioinformatics 37 (12), 1781-1782, 2021 | 7 | 2021 |
A fault-tolerant processing method and strategy of web service composition Y Dong, L Lei, MB Llinares Advances in Computer Science, Environment, Ecoinformatics, and Education …, 2011 | 3 | 2011 |
Identifiers. org: Compact Identifier services in the cloud. MB Llinares, J Ferrer-Gómez, NS Juty, CA Goble, SM Wimalaratne, ... Bioinform. 37 (12), 1781-1782, 2021 | 1 | 2021 |
A decoupled, modular and scriptable architecture for tools to curate data platforms M Langenstein, H Hermjakob, M Bernal Llinares Bioinformatics 37 (20), 3693-3694, 2021 | | 2021 |
D4. 4 Organizational IDs in Practice C Ferguson, S Lambert, MB Llinares, F Madden, R Dasler, M Fenner, ... | | 2019 |
Identifiers. org Compact Identifier services S Wimalaratne, M Bernal-Llinares, N Juty, H Hermjakob Semantic Web Applications and Tools for Healthcare and Life Sciences, 2018 | | 2018 |
Contextual Hub Analysis Tool (CHAT): A Cytoscape app for T Muetze, IH Goenawan, HL Wiencko, M Bernal-Llinares, K Bryan, ... | | 2016 |
A method for web services fault tolerance based on ripple effect analysis D Yang, L Liu, MB Llinares Key Engineering Materials 474, 1617-1620, 2011 | | 2011 |
Interoperability in the Building of Next Generation of Collaborative Working Environments MA Martínez-Carreras, A Ruiz-Martínez, MB Llinares Electronic Business Interoperability: Concepts, Opportunities and Challenges …, 2011 | | 2011 |
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS. SA Kennedy, MA Jarboui, S Srihari, C Raso, K Bryan, L Dernayka, ... | | |
Data Commons Pilot Phase Consortium MB Llinares, C Castillo, RK Chard, M Crosas, M Fenner, DZ Flamig, ... | | |
CHAT User Manual T Muetze, IH Goenawan, HL Wiencko, M Bernal-Llinares, K Bryan, ... | | |