| Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT S Sarmashghi, M Balaban, E Rachtman, B Touri, S Mirarab, V Bafna PLoS computational biology 17 (11), e1009449, 2021 | 28 | 2021 |
| In Vivo Imaging of the Segregation of the 2 Chromosomes and the Cell Division Proteins of Rhodobacter sphaeroides Reveals an Unexpected Role for MipZ N Dubarry, CR Willis, G Ball, C Lesterlin, JP Armitage MBio 10 (1), 10.1128/mbio. 02515-18, 2019 | 25 | 2019 |
| The impact of contaminants on the accuracy of genome skimming and the effectiveness of exclusion read filters E Rachtman, M Balaban, V Bafna, S Mirarab Molecular Ecology Resources 20 (3), 649-661, 2020 | 24 | 2020 |
| CONSULT: accurate contamination removal using locality-sensitive hashing E Rachtman, V Bafna, S Mirarab NAR Genomics and Bioinformatics 3 (3), lqab071, 2021 | 20 | 2021 |
| Quantifying the uncertainty of assembly-free genome-wide distance estimates and phylogenetic relationships using subsampling E Rachtman, S Sarmashghi, V Bafna, S Mirarab Cell systems 13 (10), 817-829. e3, 2022 | 7 | 2022 |
| CONSULT-II: accurate taxonomic identification and profiling using locality-sensitive hashing AOB Şapcı, E Rachtman, S Mirarab Bioinformatics 40 (4), btae150, 2024 | 5 | 2024 |
| Uncertainty quantification using subsampling for assembly-free estimates of genomic distance and phylogenetic relationships E Rachtman, S Sarmashghi, V Bafna, S Mirarab International Conference on Research in Computational Molecular Biology, 366-368, 2022 | 4 | 2022 |
| CONSULT-II: taxonomic identification using locality sensitive hashing AOB Şapcı, E Rachtman, S Mirarab RECOMB International Workshop on Comparative Genomics, 196-214, 2023 | 1 | 2023 |
| Alignment-free genomic distance estimation: from conventional methods to machine learning E Rachtman University of California, San Diego, 2023 | | 2023 |
| Synthesis of ultrasmall II-VI and III-VI semiconductor nanocrystals, nanowires and nanoplatelets G Kalyuzhny, K Gong, M Jung, S Cook, E Rachtman ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 241, 2011 | | 2011 |
| H-1, C-13 and P-31 NMR study of precursor evolution in the synthesis of magic-size II-VI semiconductor nanocrystals E Rachtman, M Jung, AC Johnston-Peck, JB Tracy, G Kalyuzhny ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 241, 2011 | | 2011 |
| Novel statistical methods to leverage low-coverage whole-genome sequencing data in biodiversity studies S Sarmashghi, M Balaban, E Rachtman, S Mirarab, V Bafna 2020 ESA Annual Meeting (August 3-6), 0 | | |
