ViPR: an open bioinformatics database and analysis resource for virology research BE Pickett, EL Sadat, Y Zhang, JM Noronha, RB Squires, V Hunt, M Liu, ... Nucleic acids research 40 (D1), D593-D598, 2012 | 732 | 2012 |
A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway MA Miller, T Schwartz, BE Pickett, S He, EB Klem, RH Scheuermann, ... Evolutionary Bioinformatics 2015 (11), 43-48, 2015 | 497 | 2015 |
Influenza Research Database: an integrated bioinformatics resource for influenza research and surveillance RB Squires, J Noronha, V Hunt, A García-Sastre, C Macken, N Baumgarth, ... Influenza Other Respiratory Viruses, 2012 | 348 | 2012 |
Influenza Research Database: An integrated bioinformatics resource for influenza virus research Y Zhang, BD Aevermann, TK Anderson, DF Burke, G Dauphin, Z Gu, S He, ... Nucleic acids research 45 (D1), D466-D474, 2017 | 338 | 2017 |
Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community BE Pickett, DS Greer, Y Zhang, L Stewart, L Zhou, G Sun, Z Gu, S Kumar, ... Viruses 4 (11), 3209-3226, 2012 | 184 | 2012 |
Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection D Kaul, R Rathnasinghe, M Ferres, GS Tan, A Barrera, BE Pickett, ... Nature communications 11 (1), 1-12, 2020 | 97 | 2020 |
Evidence for separation of HCV subtype 1a into two distinct clades BE Pickett, R Striker, EJ Lefkowitz Journal of viral hepatitis 18 (9), 608-618, 2011 | 84 | 2011 |
Growth and adaptation of Zika virus in mammalian and mosquito cells LA Moser, BT Boylan, FR Moreira, LJ Myers, EL Svenson, NB Fedorova, ... PLoS Neglected Tropical Diseases, 2018 | 56 | 2018 |
Standardized Metadata for Human Pathogen/Vector Genomic Sequences VG Dugan, SJ Emrich, GI Giraldo-Calderón, OS Harb, RM Newman, ... PLoS One 9 (6), 2014 | 46 | 2014 |
A comprehensive collection of systems biology data characterizing the host response to viral infection BD Aevermann, BE Pickett, S Kumar, EB Klem, S Agnihothram, ... Scientific data 1 (1), 1-21, 2014 | 45 | 2014 |
Influenza virus sequence feature variant type analysis: evidence of a role for NS1 in influenza virus host range restriction JM Noronha, M Liu, RB Squires, BE Pickett, BG Hale, GM Air, ... Journal of virology 86 (10), 5857-5866, 2012 | 44 | 2012 |
Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis VAP Mariana G. Ferrarini, Avantika Lal, Rita Rebollo, Andreas Gruber, Andrea ... Communications Biology 4 (1), 2021 | 41 | 2021 |
Metadata-driven comparative analysis tool for sequences (meta-CATS): an automated process for identifying significant sequence variations that correlate with virus attributes BE Pickett, M Liu, EL Sadat, RB Squires, JM Noronha, S He, W Jen, ... Virology 447 (1-2), 45-51, 2013 | 39 | 2013 |
Identification of diagnostic peptide regions that distinguish Zika virus from related mosquito-borne Flaviviruses AJ Lee, R Bhattacharya, RH Scheuermann, BE Pickett PLoS One 12 (5), 2017 | 37 | 2017 |
Collective Interactions Augment Influenza A Virus Replication in a Host-Dependent Manner KL Phipps, K Ganti, NT Jacobs, CY Lee, S Carnaccini, MC White, ... Nature Microbiology, 2020 | 35 | 2020 |
Recombination in West Nile Virus: minimal contribution to genomic diversity BE Pickett, EJ Lefkowitz Virology Journal 6, 1-7, 2009 | 35 | 2009 |
Whole-genome sequencing and analyses identify high genetic heterogeneity, diversity and endemicity of rotavirus genotype P[6] strains circulating in Africa MM Nyaga, Y Tan, ML Seheri, RA Halpin, A Akopov, KM Stucker, ... Infection, Genetics and Evolution 63, 79-88, 2018 | 32 | 2018 |
Diversifying selection analysis predicts antigenic evolution of 2009 pandemic H1N1 influenza A virus in humans AJ Lee, SR Das, W Wang, T Fitzgerald, BE Pickett, BD Aevermann, ... Journal of virology 89 (10), 5427-5440, 2015 | 32 | 2015 |
Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains. S Shrivastava, V Puri, KA Dilley, E Ngouajio, J Shifflett, LM Oldfield, ... Nature Scientific Reports 8 (1), 15843, 2018 | 29 | 2018 |
Differing epidemiological dynamics of Chikungunya virus in the Americas during the 2014-2015 epidemic Y Tan, BE Pickett, S Shrivastava, L Gresh, A Balmaseda, P Amedeo, L Hu, ... PLoS Neglected Tropical Diseases, 2018 | 29 | 2018 |