The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud K Wolstencroft, R Haines, D Fellows, A Williams, D Withers, S Owen, ... Nucleic acids research 41 (W1), W557-W561, 2013 | 946 | 2013 |
PROV-O: The PROV Ontology T Lebo, S Sahoo, D McGuinness, K Belhajjame, J Cheney, D Corsar, ... W3C Recommendation, 2013 | 901* | 2013 |
Common workflow language, v1.0 P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ... Figshare, 2016 | 280* | 2016 |
Taverna, reloaded P Missier, S Soiland-Reyes, S Owen, W Tan, A Nenadic, I Dunlop, ... Scientific and Statistical Database Management: 22nd International …, 2010 | 258 | 2010 |
Workflow-centric research objects: First class citizens in scholarly discourse. Ó Corcho, D Garijo Verdejo, K Belhajjame, J Zhao, P Missier, D Newman, ... Informatica, 2012 | 168 | 2012 |
PROV model primer K Belhajjame, H Deus, D Garijo, G Klyne, P Missier, S Soiland-Reyes, ... URL: http://www.w3.org/TR/prov-primer, 2012 | 158* | 2012 |
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15, 1-9, 2014 | 156 | 2014 |
FAIR computational workflows C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ... Data Intelligence 2 (1-2), 108-121, 2020 | 153 | 2020 |
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data JA McMurry, N Juty, N Blomberg, T Burdett, T Conlin, N Conte, M Courtot, ... PLoS biology 15 (6), e2001414, 2017 | 150 | 2017 |
FAIRDOMHub: a repository and collaboration environment for sharing systems biology research K Wolstencroft, O Krebs, JL Snoep, NJ Stanford, F Bacall, M Golebiewski, ... Nucleic acids research 45 (D1), D404-D407, 2017 | 122 | 2017 |
PAV ontology: provenance, authoring and versioning P Ciccarese, S Soiland-Reyes, K Belhajjame, AJG Gray, C Goble, T Clark Journal of Biomedical Semantics 4 (37), 2013 | 122 | 2013 |
Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language MR Crusoe, S Abeln, A Iosup, P Amstutz, J Chilton, N Tijanić, H Ménager, ... Communications of the ACM 65 (6), 54-63, 2022 | 121 | 2022 |
Packaging research artefacts with RO-Crate S Soiland-Reyes, P Sefton, M Crosas, LJ Castro, F Coppens, ... Data Science, 2022 | 105* | 2022 |
FAIR principles for research software (FAIR4RS principles) NP Chue Hong, DS Katz, M Barker, AL Lamprecht, C Martinez, ... Zenodo, 2022 | 95 | 2022 |
Open Annotation data model R Sanderson, P Ciccarese, H Van de Sompel, S Bradshaw, D Brickley, ... W3C Community draft, 2013 | 85* | 2013 |
The role of metadata in reproducible computational research J Leipzig, D Nüst, CT Hoyt, K Ram, J Greenberg Patterns 2 (9), 2021 | 80 | 2021 |
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe GigaScience 8 (11), giz095, 2019 | 79 | 2019 |
Designing the W3C open annotation data model R Sanderson, P Ciccarese, H Van De Sompel Association for Computing Machinery, 2013 | 64 | 2013 |
Implementing FAIR digital objects in the EOSC-Life workflow collaboratory C Goble, S Soiland-Reyes, F Bacall, S Owen, A Williams, I Eguinoa, ... Zenodo, 2021 | 60* | 2021 |
Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data P Li, JI Castrillo, G Velarde, I Wassink, S Soiland-Reyes, S Owen, ... BMC bioinformatics 9, 1-11, 2008 | 57 | 2008 |