pAtH-prediction of Amyloidogenicity by threading and Machine Learning JW Wojciechowski, M Kotulska Scientific Reports 10 (1), 1-9, 2020 | 23 | 2020 |
Amylograph: a comprehensive database of amyloid–amyloid interactions M Burdukiewicz, D Rafacz, A Barbach, K Hubicka, L Bąkała, A Lassota, ... Nucleic Acids Research 51 (D1), D352-D357, 2023 | 10 | 2023 |
Variability of Amyloid Propensity in Imperfect Repeats of CsgA Protein of Salmonella enterica and Escherichia coli N Szulc, M Gąsior-Głogowska, JW Wojciechowski, M Szefczyk, AM Żak, ... International journal of molecular sciences 22 (10), 5127, 2021 | 9 | 2021 |
A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins M Kamal, L Tokmakjian, J Knox, P Mastrangelo, J Ji, H Cai, ... Elife 11, e79396, 2022 | 8 | 2022 |
Exploring a diverse world of effector domains and amyloid signaling motifs in fungal NLR proteins JW Wojciechowski, E Tekoglu, M Gąsior-Głogowska, V Coustou, N Szulc, ... PLoS Computational Biology 18 (12), e1010787, 2022 | 6 | 2022 |
Bioinformatics methods in predicting amyloid propensity of peptides and proteins M Kotulska, JW Wojciechowski Computer Simulations of Aggregation of Proteins and Peptides, 1-15, 2022 | 6 | 2022 |
Bioinformatics methods for identification of amyloidogenic peptides show robustness to misannotated training data N Szulc, M Burdukiewicz, M Gąsior-Głogowska, JW Wojciechowski, ... Scientific reports 11 (1), 8934, 2021 | 5 | 2021 |
Development and validation of a virtual gelatin model using molecular modeling computational tools L Radosinski, K Labus, P Zemojtel, JW Wojciechowski Molecules 24 (18), 3365, 2019 | 5 | 2019 |
Structural effects of charge destabilization and amino acid substitutions in amyloid fragments of CsgA N Szulc, M Gąsior-Głogowska, P Żyłka, M Szefczyk, JW Wojciechowski, ... Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 313, 124094, 2024 | 1 | 2024 |
PACT-Prediction of amyloid cross-interaction by threading JW Wojciechowski, W Szczurek, N Szulc, M Szefczyk, M Kotulska Scientific Reports 13 (1), 22268, 2023 | 1 | 2023 |
The role of tandem repeats in bacterial functional amyloids AW Nowakowska, JW Wojciechowski, N Szulc, M Kotulska Journal of Structural Biology 215 (3), 108002, 2023 | 1 | 2023 |
Cytotoxic Staphylococcus aureus PSMα3 inhibits the aggregation of human insulin in vitro A Kalitnik, M Szefczyk, AW Wojciechowska, JW Wojciechowski, ... Physical Chemistry Chemical Physics 26 (21), 15587-15599, 2024 | | 2024 |