| MiXCR: software for comprehensive adaptive immunity profiling DA Bolotin, S Poslavsky, I Mitrophanov, M Shugay, IZ Mamedov, ... Nature methods 12 (5), 380-381, 2015 | 1488 | 2015 |
| VDJtools: unifying post-analysis of T cell receptor repertoires M Shugay, DV Bagaev, MA Turchaninova, DA Bolotin, OV Britanova, ... PLoS computational biology 11 (11), e1004503, 2015 | 570 | 2015 |
| Age-related decrease in TCR repertoire diversity measured with deep and normalized sequence profiling OV Britanova, EV Putintseva, M Shugay, EM Merzlyak, MA Turchaninova, ... The Journal of Immunology 192 (6), 2689-2698, 2014 | 467 | 2014 |
| Towards error-free profiling of immune repertoires M Shugay, OV Britanova, EM Merzlyak, MA Turchaninova, IZ Mamedov, ... Nature methods 11 (6), 653-655, 2014 | 456 | 2014 |
| VDJdb: a curated database of T-cell receptor sequences with known antigen specificity M Shugay, DV Bagaev, IV Zvyagin, RM Vroomans, JC Crawford, G Dolton, ... Nucleic acids research 46 (D1), D419-D427, 2018 | 442 | 2018 |
| VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium DV Bagaev, RMA Vroomans, J Samir, U Stervbo, C Rius, G Dolton, ... Nucleic acids research 48 (D1), D1057-D1062, 2020 | 334 | 2020 |
| Antigen receptor repertoire profiling from RNA-seq data DA Bolotin, S Poslavsky, AN Davydov, FE Frenkel, L Fanchi, ... Nature biotechnology 35 (10), 908-911, 2017 | 281 | 2017 |
| tcR: an R package for T cell receptor repertoire advanced data analysis VI Nazarov, MV Pogorelyy, EA Komech, IV Zvyagin, DA Bolotin, M Shugay, ... BMC bioinformatics 16, 1-5, 2015 | 250 | 2015 |
| SARS-CoV-2 epitopes are recognized by a public and diverse repertoire of human T cell receptors AS Shomuradova, MS Vagida, SA Sheetikov, KV Zornikova, D Kiryukhin, ... Immunity 53 (6), 1245-1257. e5, 2020 | 237 | 2020 |
| MiTCR: software for T-cell receptor sequencing data analysis DA Bolotin, M Shugay, IZ Mamedov, EV Putintseva, MA Turchaninova, ... Nature methods 10 (9), 813-814, 2013 | 197 | 2013 |
| High-quality full-length immunoglobulin profiling with unique molecular barcoding MA Turchaninova, A Davydov, OV Britanova, M Shugay, V Bikos, ... Nature protocols 11 (9), 1599-1616, 2016 | 192 | 2016 |
| Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data F Rubelt, CE Busse, SAC Bukhari, JP Bürckert, E Mariotti-Ferrandiz, ... Nature immunology 18 (12), 1274-1278, 2017 | 167 | 2017 |
| A mechanism for expansion of regulatory T-cell repertoire and its role in self-tolerance Y Feng, J van der Veeken, M Shugay, EV Putintseva, HU Osmanbeyoglu, ... Nature 528 (7580), 132-136, 2015 | 167 | 2015 |
| Pairing of T‐cell receptor chains via emulsion PCR MA Turchaninova, OV Britanova, DA Bolotin, M Shugay, EV Putintseva, ... European journal of immunology 43 (9), 2507-2515, 2013 | 152 | 2013 |
| Dynamics of individual T cell repertoires: from cord blood to centenarians OV Britanova, M Shugay, EM Merzlyak, DB Staroverov, EV Putintseva, ... The Journal of Immunology 196 (12), 5005-5013, 2016 | 151 | 2016 |
| Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing IV Zvyagin, MV Pogorelyy, ME Ivanova, EA Komech, M Shugay, ... Proceedings of the National Academy of Sciences 111 (16), 5980-5985, 2014 | 130 | 2014 |
| Detecting T cell receptors involved in immune responses from single repertoire snapshots MV Pogorelyy, AA Minervina, M Shugay, DM Chudakov, YB Lebedev, ... PLoS Biology 17 (6), e3000314, 2019 | 116 | 2019 |
| Oncofuse: a computational framework for the prediction of the oncogenic potential of gene fusions M Shugay, I Ortiz de Mendíbil, JL Vizmanos, FJ Novo Bioinformatics 29 (20), 2539-2546, 2013 | 109 | 2013 |
| Quantitative profiling of immune repertoires for minor lymphocyte counts using unique molecular identifiers ES Egorov, EM Merzlyak, AA Shelenkov, OV Britanova, GV Sharonov, ... The Journal of Immunology 194 (12), 6155-6163, 2015 | 108 | 2015 |
| Benchmarking of T cell receptor repertoire profiling methods reveals large systematic biases P Barennes, V Quiniou, M Shugay, ES Egorov, AN Davydov, ... Nature biotechnology 39 (2), 236-245, 2021 | 99 | 2021 |
Dmitriy ChudakovIBCH, RNIMU, SKOLTECH, CEITEC, ADSCC, Milteniy, MiLaboratories在 ibch.ru 的电子邮件经过验证
