| Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast C Miller, B Schwalb, K Maier, D Schulz, S Dümcke, B Zacher, A Mayer, ... Molecular systems biology 7 (1), 458, 2011 | 469 | 2011 |
| TT-seq maps the human transient transcriptome B Schwalb, M Michel, B Zacher, K Frühauf, C Demel, A Tresch, J Gagneur, ... Science 352 (6290), 1225-1228, 2016 | 459 | 2016 |
| Fine mapping of genome activation in bovine embryos by RNA sequencing A Graf, S Krebs, V Zakhartchenko, B Schwalb, H Blum, E Wolf Proceedings of the National Academy of Sciences 111 (11), 4139-4144, 2014 | 331 | 2014 |
| Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation M Sun, B Schwalb, D Schulz, N Pirkl, S Etzold, L Larivière, KC Maier, ... Genome research 22 (7), 1350-1359, 2012 | 320 | 2012 |
| Global analysis of eukaryotic mRNA degradation reveals Xrn1-dependent buffering of transcript levels M Sun, B Schwalb, N Pirkl, KC Maier, A Schenk, H Failmezger, A Tresch, ... Molecular cell 52 (1), 52-62, 2013 | 285 | 2013 |
| Transcriptome surveillance by selective termination of noncoding RNA synthesis D Schulz, B Schwalb, A Kiesel, C Baejen, P Torkler, J Gagneur, J Soeding, ... Cell 155 (5), 1075-1087, 2013 | 264 | 2013 |
| The implication of early chromatin changes in X chromosome inactivation JJ Żylicz, A Bousard, K Žumer, F Dossin, E Mohammad, ST da Rocha, ... Cell 176 (1), 182-197. e23, 2019 | 239 | 2019 |
| CDK9-dependent RNA polymerase II pausing controls transcription initiation S Gressel, B Schwalb, TM Decker, W Qin, H Leonhardt, D Eick, P Cramer Elife 6, e29736, 2017 | 206 | 2017 |
| Genome-wide analysis of RNA polymerase II termination at protein-coding genes C Baejen, J Andreani, P Torkler, S Battaglia, B Schwalb, M Lidschreiber, ... Molecular cell 66 (1), 38-49. e6, 2017 | 122 | 2017 |
| Periodic mRNA synthesis and degradation co‐operate during cell cycle gene expression P Eser, C Demel, KC Maier, B Schwalb, N Pirkl, DE Martin, P Cramer, ... Molecular systems biology 10 (1), 717, 2014 | 110 | 2014 |
| Architecture of the RNA polymerase II-Paf1C-TFIIS transcription elongation complex Y Xu, C Bernecky, CT Lee, KC Maier, B Schwalb, D Tegunov, JM Plitzko, ... Nature communications 8 (1), 15741, 2017 | 100 | 2017 |
| Selective Mediator dependence of cell-type-specifying transcription MG Jaeger, B Schwalb, SD Mackowiak, T Velychko, A Hanzl, H Imrichova, ... Nature genetics 52 (7), 719-727, 2020 | 93 | 2020 |
| Integrator is a genome-wide attenuator of non-productive transcription S Lykke-Andersen, K Žumer, EŠ Molska, JO Rouvière, G Wu, C Demel, ... Molecular cell 81 (3), 514-529. e6, 2021 | 92 | 2021 |
| Accurate promoter and enhancer identification in 127 ENCODE and roadmap epigenomics cell types and tissues by GenoSTAN B Zacher, M Michel, B Schwalb, P Cramer, A Tresch, J Gagneur PloS one 12 (1), e0169249, 2017 | 88 | 2017 |
| Drosophila miR-277 controls branched-chain amino acid catabolism and affects lifespan SM Esslinger, B Schwalb, S Helfer, KM Michalik, H Witte, KC Maier, ... RNA biology 10 (6), 1042-1056, 2013 | 81 | 2013 |
| Promoter distortion and opening in the RNA polymerase II cleft C Dienemann, B Schwalb, S Schilbach, P Cramer Molecular cell 73 (1), 97-106. e4, 2019 | 80 | 2019 |
| The pause-initiation limit restricts transcription activation in human cells S Gressel, B Schwalb, P Cramer Nature communications 10 (1), 3603, 2019 | 74 | 2019 |
| CDK12 globally stimulates RNA polymerase II transcription elongation and carboxyl-terminal domain phosphorylation M Tellier, J Zaborowska, L Caizzi, E Mohammad, T Velychko, B Schwalb, ... Nucleic acids research 48 (14), 7712-7727, 2020 | 73 | 2020 |
| Mediator phosphorylation prevents stress response transcription during non-stress conditions C Miller, I Matic, KC Maier, B Schwalb, S Roether, K Strässer, A Tresch, ... Journal of Biological Chemistry 287 (53), 44017-44026, 2012 | 55 | 2012 |
| TT‐seq captures enhancer landscapes immediately after T‐cell stimulation M Michel, C Demel, B Zacher, B Schwalb, S Krebs, H Blum, J Gagneur, ... Molecular systems biology 13 (3), 920, 2017 | 53 | 2017 |
