Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux Q Wang, Y Zhang, C Yang, H Xiong, Y Lin, J Yao, H Li, L Xie, W Zhao, ... Science 327 (5968), 1004-1007, 2010 | 1124 | 2010 |
MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain M Somel, S Guo, N Fu, Z Yan, HY Hu, Y Xu, Y Yuan, Z Ning, Y Hu, ... Genome research 20 (9), 1207-1218, 2010 | 345 | 2010 |
Widespread splicing changes in human brain development and aging P Mazin, J Xiong, X Liu, Z Yan, X Zhang, M Li, L He, M Somel, Y Yuan, ... Molecular systems biology 9 (1), 633, 2013 | 235 | 2013 |
Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease X Zhang, SA Deeke, Z Ning, AE Starr, J Butcher, J Li, J Mayne, K Cheng, ... Nature communications 9 (1), 2873, 2018 | 230 | 2018 |
MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota X Zhang, Z Ning, J Mayne, JI Moore, J Li, J Butcher, SA Deeke, R Chen, ... Microbiome 4, 1-12, 2016 | 165 | 2016 |
Effect of Peptide-to-TiO2 Beads Ratio on Phosphopeptide Enrichment Selectivity Q Li, Z Ning, J Tang, S Nie, R Zeng Journal of proteome research 8 (11), 5375-5381, 2009 | 143 | 2009 |
MetaLab: an automated pipeline for metaproteomic data analysis K Cheng, Z Ning, X Zhang, L Li, B Liao, J Mayne, A Stintzi, D Figeys Microbiome 5, 1-10, 2017 | 123 | 2017 |
Assessing the impact of protein extraction methods for human gut metaproteomics X Zhang, L Li, J Mayne, Z Ning, A Stintzi, D Figeys Journal of proteomics 180, 120-127, 2018 | 106 | 2018 |
Rapid metabolic evolution in human prefrontal cortex X Fu, P Giavalisco, X Liu, G Catchpole, N Fu, ZB Ning, S Guo, Z Yan, ... Proceedings of the National Academy of Sciences 108 (15), 6181-6186, 2011 | 105 | 2011 |
An in vitro model maintaining taxon-specific functional activities of the gut microbiome L Li, E Abou-Samra, Z Ning, X Zhang, J Mayne, J Wang, K Cheng, ... Nature communications 10 (1), 4146, 2019 | 97 | 2019 |
Proteomic analysis of ascending colon biopsies from a paediatric inflammatory bowel disease inception cohort identifies protein biomarkers that differentiate Crohn's disease … AE Starr, SA Deeke, Z Ning, CK Chiang, X Zhang, W Mottawea, ... Gut 66 (9), 1573-1583, 2017 | 85 | 2017 |
Deep metaproteomics approach for the study of human microbiomes X Zhang, W Chen, Z Ning, J Mayne, D Mack, A Stintzi, R Tian, D Figeys Analytical chemistry 89 (17), 9407-9415, 2017 | 83 | 2017 |
High-coverage proteome analysis reveals the first insight of protein modification systems in the pathogenic spirochete Leptospira interrogans XJ Cao, J Dai, H Xu, S Nie, X Chang, BY Hu, QH Sheng, LS Wang, ... Cell research 20 (2), 197-210, 2010 | 81 | 2010 |
Bottom-up proteomics (2013–2015): keeping up in the era of systems biology J Mayne, Z Ning, X Zhang, AE Starr, R Chen, S Deeke, CK Chiang, B Xu, ... Analytical chemistry 88 (1), 95-121, 2016 | 80 | 2016 |
Quantitative site-specific ADP-ribosylation profiling of DNA-dependent PARPs JP Gagné, C Ethier, D Defoy, S Bourassa, MF Langelier, AA Riccio, ... DNA repair 30, 68-79, 2015 | 76 | 2015 |
Transcript and protein expression decoupling reveals RNA binding proteins and miRNAs as potential modulators of human aging YN Wei, HY Hu, GC Xie, N Fu, ZB Ning, R Zeng, P Khaitovich Genome biology 16, 1-15, 2015 | 72 | 2015 |
RapidAIM: a culture-and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs L Li, Z Ning, X Zhang, J Mayne, K Cheng, A Stintzi, D Figeys Microbiome 8, 1-16, 2020 | 70 | 2020 |
The proteomic landscape of the suprachiasmatic nucleus clock reveals large-scale coordination of key biological processes CK Chiang, N Mehta, A Patel, P Zhang, Z Ning, J Mayne, WYL Sun, ... PLoS genetics 10 (10), e1004695, 2014 | 70 | 2014 |
Evaluating in vitro culture medium of gut microbiome with orthogonal experimental design and a metaproteomics approach L Li, X Zhang, Z Ning, J Mayne, JI Moore, J Butcher, CK Chiang, D Mack, ... Journal of proteome research 17 (1), 154-163, 2018 | 52 | 2018 |
Comprehensive profiling of phosphopeptides based on anion exchange followed by flow-through enrichment with titanium dioxide (AFET) S Nie, J Dai, ZB Ning, XJ Cao, QH Sheng, R Zeng Journal of proteome research 9 (9), 4585-4594, 2010 | 52 | 2010 |