Catabolite activator protein: DNA binding and transcription activation CL Lawson, D Swigon, KS Murakami, SA Darst, HM Berman, RH Ebright Current opinion in structural biology 14 (1), 10-20, 2004 | 409 | 2004 |
A dynamical model of human immune response to influenza A virus infection B Hancioglu, D Swigon, G Clermont Journal of theoretical biology 246 (1), 70-86, 2007 | 242 | 2007 |
Theory of sequence-dependent DNA elasticity BD Coleman, WK Olson, D Swigon The Journal of chemical physics 118 (15), 7127-7140, 2003 | 162 | 2003 |
Modeling the Lac repressor-operator assembly: the influence of DNA looping on Lac repressor conformation D Swigon, BD Coleman, WK Olson Proceedings of the National Academy of Sciences 103 (26), 9879-9884, 2006 | 156 | 2006 |
Theory of supercoiled elastic rings with self-contact and its application to DNA plasmids BD Coleman, D Swigon Journal of elasticity and the physical science of solids 60, 173-221, 2000 | 152 | 2000 |
Elastic stability of DNA configurations. I. General theory I Tobias, D Swigon, BD Coleman Physical Review E 61 (1), 747, 2000 | 146 | 2000 |
Continuum model of collective cell migration in wound healing and colony expansion JC Arciero, Q Mi, MF Branca, DJ Hackam, D Swigon Biophysical journal 100 (3), 535-543, 2011 | 145 | 2011 |
Relating single-molecule measurements to thermodynamics D Keller, D Swigon, C Bustamante Biophysical journal 84 (2), 733-738, 2003 | 132 | 2003 |
Elastic stability of DNA configurations. II. Supercoiled plasmids with self-contact BD Coleman, D Swigon, I Tobias Physical Review E 61 (1), 759, 2000 | 123 | 2000 |
The elastic rod model for DNA and its application to the tertiary structure of DNA minicircles in mononucleosomes D Swigon, BD Coleman, I Tobias Biophysical journal 74 (5), 2515-2530, 1998 | 111 | 1998 |
Sequence-dependent effects in the cyclization of short DNA L Czapla, D Swigon, WK Olson Journal of chemical theory and computation 2 (3), 685-695, 2006 | 108 | 2006 |
Theory of the influence of end conditions on self‐contact in DNA loops BD Coleman, I Tobias, D Swigon The Journal of chemical physics 103 (20), 9101-9109, 1995 | 68 | 1995 |
Implications of the dependence of the elastic properties of DNA on nucleotide sequence WK Olson, D Swigon, BD Coleman Philosophical Transactions of the Royal Society of London. Series A …, 2004 | 67 | 2004 |
Theory of self–contact in Kirchhoff rods with applications to supercoiling of knotted and unknotted DNA plasmids BD Coleman, D Swigon Philosophical Transactions of the Royal Society of London. Series A …, 2004 | 62 | 2004 |
The inflammatory response to influenza A virus (H1N1): an experimental and mathematical study I Price, ED Mochan-Keef, D Swigon, GB Ermentrout, S Lukens, ... Journal of theoretical biology 374, 83-93, 2015 | 58 | 2015 |
A large-scale immuno-epidemiological simulation of influenza A epidemics S Lukens, J DePasse, R Rosenfeld, E Ghedin, E Mochan, ST Brown, ... BMC public health 14, 1-15, 2014 | 52 | 2014 |
Identifiability of linear and linear-in-parameters dynamical systems from a single trajectory S Stanhope, JE Rubin, D Swigon SIAM Journal on Applied Dynamical Systems 13 (4), 1792-1815, 2014 | 50 | 2014 |
The mathematics of DNA structure, mechanics, and dynamics D Swigon Mathematics of DNA structure, function and interactions, 293-320, 2009 | 48 | 2009 |
DNA topology confers sequence specificity to nonspecific architectural proteins J Wei, L Czapla, MA Grosner, D Swigon, WK Olson Proceedings of the National Academy of Sciences 111 (47), 16742-16747, 2014 | 45 | 2014 |
A mathematical model of intrahost pneumococcal pneumonia infection dynamics in murine strains E Mochan, D Swigon, GB Ermentrout, S Lukens, G Clermont Journal of theoretical biology 353, 44-54, 2014 | 43 | 2014 |