Drug resistance mutations in HIV: new bioinformatics approaches and challenges L Blassel, A Zhukova, CJ Villabona-Arenas, KE Atkins, S Hué, O Gascuel Current opinion in virology 51, 56-64, 2021 | 41 | 2021 |
Origin, evolution and global spread of SARS-CoV-2 A Zhukova, L Blassel, F Lemoine, M Morel, J Voznica, O Gascuel Comptes Rendus. Biologies 344 (1), 57-75, 2021 | 40 | 2021 |
COVID-Align: Accurate online alignment of hCoV-19 genomes using a profile HMM F Lemoine, L Blassel, J Voznica, G Olivier Bioinformatics, 2020 | 15 | 2020 |
Using machine learning and big data to explore the drug resistance landscape in HIV L Blassel, A Tostevin, CJ Villabona-Arenas, M Peeters, S Hué, O Gascuel PLOS Computational Biology 17 (8), e1008873, 2021 | 14 | 2021 |
Mapping-friendly sequence reductions: Going beyond homopolymer compression L Blassel, P Medvedev, R Chikhi Iscience 25 (11), 2022 | 5 | 2022 |
Phyloformer: Fast, accurate and versatile phylogenetic reconstruction with deep neural networks L Nesterenko, L Blassel, P Veber, B Boussau, L Jacob bioRxiv, 2024.06. 17.599404, 2024 | 1 | 2024 |
From sequences to knowledge, improving and learning from sequence alignments L Blassel Sorbonne Université, 2022 | | 2022 |