Initial sequencing and analysis of the human genome US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ... Nature 409 (6822), 860-921, 2001 | 25220 | 2001 |
Improved microbial gene identification with GLIMMER AL Delcher, D Harmon, S Kasif, O White, SL Salzberg Nucleic acids research 27 (23), 4636-4641, 1999 | 2999 | 1999 |
Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles JJ Faith, B Hayete, JT Thaden, I Mogno, J Wierzbowski, G Cottarel, ... PLoS biology 5 (1), e8, 2007 | 1915 | 2007 |
Microbial gene identification using interpolated Markov models SL Salzberg, AL Delcher, S Kasif, O White Nucleic acids research 26 (2), 544-548, 1998 | 1363 | 1998 |
A system for induction of oblique decision trees SK Murthy, S Kasif, S Salzberg Journal of artificial intelligence research 2, 1-32, 1994 | 1356 | 1994 |
Alignment of whole genomes AL Delcher, S Kasif, RD Fleischmann, J Peterson, O White, SL Salzberg Nucleic acids research 27 (11), 2369-2376, 1999 | 1303 | 1999 |
Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains M Ku, RP Koche, E Rheinbay, EM Mendenhall, M Endoh, TS Mikkelsen, ... PLoS genetics 4 (10), e1000242, 2008 | 1176 | 2008 |
Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells ML Suvà, E Rheinbay, SM Gillespie, AP Patel, H Wakimoto, SD Rabkin, ... Cell 157 (3), 580-594, 2014 | 962 | 2014 |
Extracting conserved gene expression motifs from gene expression data TM Murali, S Kasif Biocomputing 2003, 77-88, 2002 | 558 | 2002 |
Predicting protein function from protein/protein interaction data: a probabilistic approach S Letovsky, S Kasif Bioinformatics 19 (suppl_1), i197-i204, 2003 | 510 | 2003 |
Deep sequencing of the oral microbiome reveals signatures of periodontal disease B Liu, LL Faller, N Klitgord, V Mazumdar, M Ghodsi, DD Sommer, ... PloS one 7 (6), e37919, 2012 | 485 | 2012 |
Whole-genome annotation by using evidence integration in functional-linkage networks U Karaoz, TM Murali, S Letovsky, Y Zheng, C Ding, CR Cantor, S Kasif Proceedings of the National Academy of Sciences 101 (9), 2888-2893, 2004 | 418 | 2004 |
An aberrant transcription factor network essential for Wnt signaling and stem cell maintenance in glioblastoma E Rheinbay, ML Suvà, SM Gillespie, H Wakimoto, AP Patel, M Shahid, ... Cell reports 3 (5), 1567-1579, 2013 | 325 | 2013 |
OC1: A randomized algorithm for building oblique decision trees SK Murthy, S Kasif, S Salzberg, R Beigel Proceedings of AAAI 93, 322-327, 1993 | 264 | 1993 |
Immediate-early and delayed primary response genes are distinct in function and genomic architecture JW Tullai, ME Schaffer, S Mullenbrock, G Sholder, S Kasif, GM Cooper Journal of Biological Chemistry 282 (33), 23981-23995, 2007 | 255 | 2007 |
RankGene: identification of diagnostic genes based on expression data Y Su, TM Murali, V Pavlovic, M Schaffer, S Kasif Bioinformatics 19 (12), 1578-1579, 2003 | 245 | 2003 |
Induction of oblique decision trees D Heath, S Kasif, S Salzberg IJCAI 1993, 1002-1007, 1993 | 245 | 1993 |
Network-based analysis of affected biological processes in type 2 diabetes models M Liu, A Liberzon, SW Kong, WR Lai, PJ Park, IS Kohane, S Kasif PLoS genetics 3 (6), e96, 2007 | 229 | 2007 |
Computational methods in molecular biology SL Salzberg, DB Searls, S Kasif Elsevier, 1998 | 218 | 1998 |
On the parallel complexity of discrete relaxation in constraint satisfaction networks S Kasif Artificial Intelligence 45 (3), 275-286, 1990 | 217 | 1990 |