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Madhavi Tippani
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Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
KR Maynard, L Collado-Torres, LM Weber, C Uytingco, BK Barry, ...
Nature neuroscience 24 (3), 425-436, 2021
5732021
Single-nucleus transcriptome analysis reveals cell-type-specific molecular signatures across reward circuitry in the human brain
MN Tran, KR Maynard, A Spangler, LA Huuki, KD Montgomery, ...
Neuron 109 (19), 3088-3103. e5, 2021
1492021
dotdotdot: an automated approach to quantify multiplex single molecule fluorescent in situ hybridization (smFISH) images in complex tissues
KR Maynard, M Tippani, Y Takahashi, BDN Phan, TM Hyde, AE Jaffe, ...
Nucleic acids research 48 (11), e66-e66, 2020
652020
Electrophysiological measures from human iPSC-derived neurons are associated with schizophrenia clinical status and predict individual cognitive performance
SC Page, SR Sripathy, F Farinelli, Z Ye, Y Wang, DJ Hiler, EA Pattie, ...
Proceedings of the National Academy of Sciences 119 (3), e2109395119, 2022
452022
Assessment of corneal stromal remodeling and regeneration after photorefractive keratectomy
PB Kivanany, KC Grose, M Tippani, S Su, WM Petroll
Scientific reports 8 (1), 12580, 2018
332018
Integrated single cell and unsupervised spatial transcriptomic analysis defines molecular anatomy of the human dorsolateral prefrontal cortex
L Huuki-Myers, A Spangler, N Eagles, KD Montgomery, SH Kwon, B Guo, ...
BioRxiv, 2023
252023
VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data
M Tippani, HR Divecha, JL Catallini, SH Kwon, LM Weber, A Spangler, ...
Biological Imaging 3, e23, 2023
102023
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics
LM Weber, HR Divecha, MN Tran, SH Kwon, A Spangler, KD Montgomery, ...
Elife 12, RP84628, 2024
82024
CaPTure: Calcium PeakToolbox for analysis of in vitro calcium imaging data
M Tippani, EA Pattie, BA Davis, CV Nguyen, Y Wang, SR Sripathy, ...
BMC neuroscience 23 (1), 71, 2022
82022
Single molecule in situ hybridization reveals distinct localizations of schizophrenia risk-related transcripts SNX19 and AS3MT in human brain
Y Takahashi, KR Maynard, M Tippani, AE Jaffe, K Martinowich, ...
Molecular psychiatry 26 (7), 3536-3547, 2021
62021
Influence of Alzheimer's Disease Related Neuropathology on Local Microenvironment Gene Expression in the Human Inferior Temporal Cortex
SH Kwon, S Parthiban, M Tippani, HR Divecha, NJ Eagles, JS Lobana, ...
GEN Biotechnology 2 (5), 399-417, 2023
52023
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics
LM Weber, HR Divecha, MN Tran, SH Kwon, A Spangler, KD Montgomery, ...
bioRxiv, 2022
52022
A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex
LA Huuki-Myers, A Spangler, NJ Eagles, KD Montgomery, SH Kwon, ...
Science 384 (6698), eadh1938, 2024
42024
SUFI: an automated approach to spectral unmixing of fluorescent multiplex images captured in mouse and post-mortem human brain tissues
V Sadashivaiah, M Tippani, SC Page, SH Kwon, SV Bach, RA Bharadwaj, ...
BMC neuroscience 24 (1), 6, 2023
42023
Induction of Bdnf from promoter I following electroconvulsive seizures contributes to structural plasticity in neurons of the piriform cortex
AD Ramnauth, KR Maynard, AS Kardian, BDN Phan, M Tippani, ...
Brain stimulation 15 (2), 427-433, 2022
42022
An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus
ED Nelson, M Tippani, AD Ramnauth, HR Divecha, RA Miller, NJ Eagles, ...
BioRxiv, 2024
32024
TCF4 mutations disrupt synaptic function through dysregulation of RIMBP2 in patient-derived cortical neurons
BA Davis, HY Chen, Z Ye, I Ostlund, M Tippani, D Das, SR Sripathy, ...
Biological Psychiatry 95 (7), 662-675, 2024
32024
Spatially-resolved transcriptomics of human dentate gyrus across postnatal lifespan reveals heterogeneity in markers for proliferation, extracellular matrix, and neuroinflammation
AD Ramnauth, M Tippani, HR Divecha, AR Papariello, RA Miller, ...
BioRxiv, 2023.11. 20.567883, 2023
12023
Developing and Assessing methods for calcium imaging data
J Catallini
Johns Hopkins University, 2020
12020
Spatiotemporal analysis of gene expression in the human dentate gyrus reveals age-associated changes in cellular maturation and neuroinflammation
AD Ramnauth, M Tippani, HR Divecha, AR Papariello, RA Miller, ...
bioRxiv, 2024
2024
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