Repopulating microglia promote brain repair in an IL-6-dependent manner EF Willis, KPA MacDonald, QH Nguyen, AL Garrido, ER Gillespie, ... Cell 180 (5), 833-846. e16, 2020 | 351 | 2020 |
Spatial omics and multiplexed imaging to explore cancer biology SM Lewis, ML Asselin-Labat, Q Nguyen, J Berthelet, X Tan, VC Wimmer, ... Nature methods 18 (9), 997-1012, 2021 | 327 | 2021 |
scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data J Alquicira-Hernandez, A Sathe, HP Ji, Q Nguyen, JE Powell Genome biology 20, 1-17, 2019 | 316 | 2019 |
stLearn: integrating spatial location, tissue morphology and gene expression to find cell types, cell-cell interactions and spatial trajectories within undissociated tissues D Pham, X Tan, J Xu, LF Grice, PY Lam, A Raghubar, J Vukovic, ... BioRxiv, 2020.05. 31.125658, 2020 | 230 | 2020 |
Single-cell transcriptomic analysis of cardiac differentiation from human PSCs reveals HOPX-dependent cardiomyocyte maturation CE Friedman, Q Nguyen, SW Lukowski, A Helfer, HS Chiu, J Miklas, ... Cell stem cell 23 (4), 586-598. e8, 2018 | 230 | 2018 |
A single‐cell transcriptome atlas of the adult human retina SW Lukowski, CY Lo, AA Sharov, Q Nguyen, L Fang, SSC Hung, L Zhu, ... The EMBO journal 38 (18), e100811, 2019 | 217 | 2019 |
Multipurpose agroforestry as a climate change resiliency option for farmers: an example of local adaptation in Vietnam Q Nguyen, MH Hoang, I Öborn, M van Noordwijk Climatic change 117 (1), 241-257, 2013 | 193 | 2013 |
Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations Q Nguyen, S Lukowski, H Chiu, A Senabouth, T Bruxner, A Christ, ... Genome Research: gr.223925.117, 2018 | 112 | 2018 |
A damaged genome’s transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks F Iannelli, A Galbiati, I Capozzo, Q Nguyen, B Magnuson, F Michelini, ... Nature communications 8 (1), 15656, 2017 | 107 | 2017 |
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds M Naval-Sanchez, Q Nguyen, S McWilliam, LR Porto-Neto, R Tellam, ... Nature communications 9 (1), 859, 2018 | 101 | 2018 |
DNA damage response inhibition at dysfunctional telomeres by modulation of telomeric DNA damage response RNAs F Rossiello, J Aguado, S Sepe, F Iannelli, Q Nguyen, S Pitchiaya, ... Nature communications 8 (1), 13980, 2017 | 101 | 2017 |
Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells D Neavin, Q Nguyen, MS Daniszewski, HH Liang, HS Chiu, YK Wee, ... Genome biology 22, 1-19, 2021 | 75 | 2021 |
Genotype-free demultiplexing of pooled single-cell RNA-seq J Xu, C Falconer, Q Nguyen, J Crawford, BD McKinnon, S Mortlock, ... Genome Biology 20 (1), 290, 2019 | 68 | 2019 |
Nicotinamide riboside attenuates age-associated metabolic and functional changes in hematopoietic stem cells X Sun, B Cao, M Naval-Sanchez, T Pham, YBY Sun, B Williams, ... Nature communications 12 (1), 2665, 2021 | 62 | 2021 |
SpaCell: integrating tissue morphology and spatial gene expression to predict disease cells X Tan, A Su, M Tran, Q Nguyen Bioinformatics, btz914, 2019 | 58 | 2019 |
Farmer portfolios, strategic diversity management and climate-change adaptation–implications for policy in Vietnam and Kenya MH Hoang, S Namirembe, M van Noordwijk, D Catacutan, I Öborn, ... Climate and Development 6 (3), 216-225, 2014 | 57 | 2014 |
Genome-scale transcriptomics of baculovirus-insect interactions. Q Nguyen, L Nielsen, S Reid Viruses 5 (11), 2721-2747, 2013 | 56 | 2013 |
Resolving the immune landscape of human prostate at a single-cell level in health and cancer ZK Tuong, KW Loudon, B Berry, N Richoz, J Jones, X Tan, Q Nguyen, ... Cell Reports 37 (12), 2021 | 52 | 2021 |
Robust mapping of spatiotemporal trajectories and cell–cell interactions in healthy and diseased tissues D Pham, X Tan, B Balderson, J Xu, LF Grice, S Yoon, EF Willis, M Tran, ... Nature communications 14 (1), 7739, 2023 | 51 | 2023 |
Single cell RNA sequencing of stem cell-derived retinal ganglion cells M Daniszewski, A Senabouth, QH Nguyen, DE Crombie, SW Lukowski, ... Scientific data 5 (1), 1-9, 2018 | 51 | 2018 |