| ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies J Tang, J Fu, Y Wang, B Li, Y Li, Q Yang, X Cui, J Hong, X Li, Y Chen, ... Briefings in bioinformatics 21 (2), 621-636, 2020 | 161 | 2020 |
| Clinical trials, progression-speed differentiating features and swiftness rule of the innovative targets of first-in-class drugs YH Li, XX Li, JJ Hong, YX Wang, JB Fu, H Yang, CY Yu, FC Li, J Hu, ... Briefings in Bioinformatics 21 (2), 649-662, 2020 | 157 | 2020 |
| Optimization of metabolomic data processing using NOREVA J Fu, Y Zhang, Y Wang, H Zhang, J Liu, J Tang, Q Yang, H Sun, W Qiu, ... Nature protocols, 1-23, 2022 | 134 | 2022 |
| Simultaneous improvement in the precision, accuracy, and robustness of label-free proteome quantification by optimizing data manipulation chains*[S] J Tang, J Fu, Y Wang, Y Luo, Q Yang, B Li, G Tu, J Hong, X Cui, Y Chen, ... Molecular & Cellular Proteomics 18 (8), 1683-1699, 2019 | 107 | 2019 |
| Convolutional neural network-based annotation of bacterial type IV secretion system effectors with enhanced accuracy and reduced false discovery J Hong, Y Luo, M Mou, J Fu, Y Zhang, W Xue, T Xie, L Tao, Y Lou, F Zhu Briefings in bioinformatics 21 (5), 1825-1836, 2020 | 102 | 2020 |
| INTEDE: interactome of drug-metabolizing enzymes J Yin, F Li, Y Zhou, M Mou, Y Lu, K Chen, J Xue, Y Luo, J Fu, X He, J Gao, ... Nucleic acids research 49 (D1), D1233-D1243, 2021 | 78 | 2021 |
| Discovery of the consistently well-performed analysis chain for SWATH-MS based pharmacoproteomic quantification J Fu, J Tang, Y Wang, X Cui, Q Yang, J Hong, X Li, S Li, Y Chen, W Xue, ... Frontiers in Pharmacology 9, 681, 2018 | 70 | 2018 |
| Expression profiles and characteristics of human lncRNA in normal and asthenozoospermia sperm X Zhang, P Zhang, D Song, S Xiong, H Zhang, J Fu, F Gao, H Chen, ... Biology of reproduction 100 (4), 982-993, 2019 | 63 | 2019 |
| Systematic identification and characterization of long non-coding RNAs in mouse mature sperm X Zhang, F Gao, J Fu, P Zhang, Y Wang, X Zeng PloS one 12 (3), e0173402, 2017 | 58 | 2017 |
| Pharmacometabonomics: data processing and statistical analysis J Fu, Y Zhang, J Liu, X Lian, J Tang, F Zhu Briefings in bioinformatics 22 (5), bbab138, 2021 | 55 | 2021 |
| Computational advances of tumor marker selection and sample classification in cancer proteomics J Tang, Y Wang, Y Luo, J Fu, Y Zhang, Y Li, Z Xiao, Y Lou, Y Qiu, F Zhu Computational and Structural Biotechnology Journal 18, 2012-2025, 2020 | 40 | 2020 |
| A critical assessment of the feature selection methods used for biomarker discovery in current metaproteomics studies J Tang, Y Wang, J Fu, Y Zhou, Y Luo, Y Zhang, B Li, Q Yang, W Xue, ... Briefings in bioinformatics 21 (4), 1378-1390, 2020 | 30 | 2020 |
| Biomarker discovery for immunotherapy of pituitary adenomas: enhanced robustness and prediction ability by modern computational tools Q Yang, Y Wang, S Zhang, J Tang, F Li, J Yin, Y Li, J Fu, B Li, Y Luo, ... International Journal of Molecular Sciences 20 (1), 151, 2019 | 28 | 2019 |
| Endoplasmic reticulum stress is involved in 2, 4-dichlorophenol-induced hepatotoxicity J Fu, X Zhang, P Chen, Y Zhang The Journal of toxicological sciences 41 (6), 745-756, 2016 | 20 | 2016 |
| Computational advances in the label-free quantification of cancer proteomics data J Tang, Y Zhang, J Fu, Y Wang, Y Li, Q Yang, L Yao, W Xue, F Zhu Current pharmaceutical design 24 (32), 3842-3858, 2018 | 16 | 2018 |
| A single-cell view on host immune transcriptional response to in vivo BCG-induced trained immunity W Li, SJ Moorlag, VACM Koeken, RJ Röring, LCJ de Bree, VP Mourits, ... Cell reports 42 (5), 2023 | 15 | 2023 |
| Metabolomics meets systems immunology J Fu, F Zhu, CJ Xu, Y Li EMBO Reports, 24(4):e55747, 2023 | 15 | 2023 |
| Advances in current diabetes proteomics: from the perspectives of label-free quantification and biomarker selection J Fu, Y Luo, M Mou, H Zhang, J Tang, Y Wang, F Zhu Current Drug Targets 21 (1), 34-54, 2020 | 14 | 2020 |
| Label-free Proteome Quantification and Evaluation J Fu, Q Yang, Y Luo, S Zhang, J Tang, Y Zhang, H Zhang, H Xu, F Zhu Briefings in Bioinformatics 1 (1), 1–9, 2022 | 12 | 2022 |
| Dynamic Clinical Success Rates for Drugs in the 21st Century Y Zhou, Y Zhang, Z Chen, S Huang, Y Li, J Fu, H Zhang, D Zhao, X Lian, ... medRxiv, 2024.02. 26.24303388, 2024 | 1 | 2024 |
