Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain KA Jolley, CM Bliss, JS Bennett, HB Bratcher, C Brehony, FM Colles, ... Microbiology 158 (4), 1005-1015, 2012 | 587 | 2012 |
Campylobacter Genotyping to Determine the Source of Human Infection SK Sheppard, JF Dallas, NJC Strachan, M MacRae, ND McCarthy, ... Clinical Infectious Diseases 48 (8), 1072-1078, 2009 | 495 | 2009 |
Advances in molecular ecology: tracking trophic links through predator–prey food‐webs SK Sheppard, JD Harwood Functional ecology 19 (5), 751-762, 2005 | 421 | 2005 |
Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter SK Sheppard, X Didelot, G Meric, A Torralbo, KA Jolley, DJ Kelly, ... Proceedings of the national academy of sciences 110 (29), 11923-11927, 2013 | 333 | 2013 |
Detection of secondary predation by PCR analyses of the gut contents of invertebrate generalist predators SK Sheppard, J Bell, KD Sunderland, J Fenlon, D Skervin, ... Molecular Ecology 14 (14), 4461-4468, 2005 | 295 | 2005 |
Convergence of Campylobacter species: implications for bacterial evolution SK Sheppard, ND McCarthy, D Falush, MCJ Maiden Science 320 (5873), 237-239, 2008 | 286 | 2008 |
Population genomics of bacterial host adaptation SK Sheppard, DS Guttman, JR Fitzgerald Nature Reviews Genetics 19 (9), 549-565, 2018 | 232 | 2018 |
CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community TR Connor, NJ Loman, S Thompson, A Smith, J Southgate, R Poplawski, ... Microbial genomics 2 (9), e000086, 2016 | 198 | 2016 |
Combined analysis of variation in core, accessory and regulatory genome regions provides a super-resolution view into the evolution of bacterial populations A McNally, Y Oren, D Kelly, B Pascoe, S Dunn, T Sreecharan, M Vehkala, ... PLoS genetics 12 (9), e1006280, 2016 | 196 | 2016 |
Campylobacter genotypes from food animals, environmental sources and clinical disease in Scotland 2005/6 SK Sheppard, JF Dallas, M MacRae, ND McCarthy, EL Sproston, ... International journal of food microbiology 134 (1-2), 96-103, 2009 | 189 | 2009 |
Campylobacter epidemiology: a descriptive study reviewing 1 million cases in England and Wales between 1989 and 2011 GL Nichols, JF Richardson, SK Sheppard, C Lane, C Sarran BMJ open 2 (4), e001179, 2012 | 186 | 2012 |
The evolution of Campylobacter jejuni and Campylobacter coli SK Sheppard, MCJ Maiden Cold Spring Harbor perspectives in biology 7 (8), a018119, 2015 | 180 | 2015 |
A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter SK Sheppard, KA Jolley, MCJ Maiden Genes 3 (2), 261-277, 2012 | 168 | 2012 |
Attribution of Campylobacter Infections in Northeast Scotland to Specific Sources by Use of Multilocus Sequence Typing NJC Strachan, FJ Gormley, O Rotariu, ID Ogden, G Miller, GM Dunn, ... The Journal of infectious diseases 199 (8), 1205-1208, 2009 | 167 | 2009 |
Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis G Meric, M Miragaia, M de Been, K Yahara, B Pascoe, L Mageiros, ... Genome biology and evolution 7 (5), 1313-1328, 2015 | 159 | 2015 |
Host Association of Campylobacter Genotypes Transcends Geographic Variation SK Sheppard, F Colles, J Richardson, AJ Cody, R Elson, A Lawson, ... Applied and Environmental Microbiology 76 (15), 5269-5277, 2010 | 157 | 2010 |
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria SC Bayliss, HA Thorpe, NM Coyle, SK Sheppard, EJ Feil Gigascience 8 (10), giz119, 2019 | 156 | 2019 |
Progressive genome‐wide introgression in agricultural Campylobacter coli SK Sheppard, X Didelot, KA Jolley, AE Darling, B Pascoe, G Meric, ... Molecular ecology 22 (4), 1051-1064, 2013 | 155 | 2013 |
A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter G Méric, K Yahara, L Mageiros, B Pascoe, MCJ Maiden, KA Jolley, ... PloS one 9 (3), e92798, 2014 | 152 | 2014 |
Cryptic ecology among host generalist Campylobacter jejuni in domestic animals SK Sheppard, L Cheng, G Meric, CPA De Haan, AK Llarena, P Marttinen, ... Molecular ecology 23 (10), 2442-2451, 2014 | 146 | 2014 |