Deep learning enables rapid identification of potent DDR1 kinase inhibitors A Zhavoronkov, YA Ivanenkov, A Aliper, MS Veselov, VA Aladinskiy, ... Nature biotechnology 37 (9), 1038-1040, 2019 | 1035 | 2019 |
Molecular sets (MOSES): A benchmarking platform for molecular generation models D Polykovskiy, A Zhebrak, B Sanchez Lengeling, S Golovanov, O Tatanov, ... Frontiers in Pharmacology 11, 1931, 2020 | 619* | 2020 |
Converging blockchain and next-generation artificial intelligence technologies to decentralize and accelerate biomedical research and healthcare P Mamoshina, L Ojomoko, Y Yanovich, A Ostrovski, A Botezatu, ... Oncotarget 9 (5), 5665, 2018 | 470 | 2018 |
Entangled conditional adversarial autoencoder for de novo drug discovery D Polykovskiy, A Zhebrak, D Vetrov, Y Ivanenkov, V Aladinskiy, ... Molecular pharmaceutics 15 (10), 4398-4405, 2018 | 251 | 2018 |
Potential 2019-nCoV 3C-like protease inhibitors designed using generative deep learning approaches A Zhavoronkov, V Aladinskiy, A Zhebrak, B Zagribelnyy, V Terentiev, ... | 235* | 2020 |
3D molecular representations based on the wave transform for convolutional neural networks D Kuzminykh, D Polykovskiy, A Kadurin, A Zhebrak, I Baskov, S Nikolenko, ... Molecular pharmaceutics 15 (10), 4378-4385, 2018 | 120 | 2018 |
Potential non-covalent SARS-CoV-2 3C-like protease inhibitors designed using generative deep learning approaches A Zhavoronkov, B Zagribelnyy, A Zhebrak, V Aladinskiy, V Terentiev, ... | 45 | 2020 |
Molecular generation for desired transcriptome changes with adversarial autoencoders R Shayakhmetov, M Kuznetsov, A Zhebrak, A Kadurin, S Nikolenko, ... Frontiers in Pharmacology 11, 269, 2020 | 35 | 2020 |
A prior of a googol gaussians: a tensor ring induced prior for generative models M Kuznetsov, D Polykovskiy, D Vetrov, A Zhebrak 33rd Conference on Neural Information Processing Systems (NeurIPS 2019), 2019 | 20 | 2019 |
Extracting invariant features from images using an equivariant autoencoder D Kuzminykh, D Polykovskiy, A Zhebrak Asian Conference on Machine Learning, 438-453, 2018 | 13 | 2018 |
Chemistry42: An AI-based platform for de novo molecular design YA Ivanenkov, A Zhebrak, D Bezrukov, B Zagribelnyy, V Aladinskiy, ... arXiv preprint arXiv:2101.09050, 2021 | 4 | 2021 |
Subset-Conditioned Generation Using Variational Autoencoder With A Learnable Tensor-Train Induced Prior M Kuznetsov, D Polykovskiy, D Vetrov, A Zhebrak Advances in Neural Information Processing Systems, Bayesian Deep Learning …, 2018 | 3 | 2018 |
Subset conditioning using variational autoencoder with a learnable tensor train induced prior A Aliper, A Zavoronkovs, A Zhebrak, D Polykovskiy, M Kuznetsov, ... US Patent 11,593,660, 2023 | 1 | 2023 |
Mutual information adversarial autoencoder A Aliper, A Zavoronkovs, A Zhebrak, A Kadurin, D Polykovskiy, ... US Patent App. 17/842,247, 2022 | 1 | 2022 |
Subset conditioning using variational autoencoder with a learnable tensor train induced prior A Aliper, A Zavoronkovs, A Zhebrak, D Polykovskiy, M Kuznetsov, ... US Patent App. 18/538,870, 2024 | | 2024 |
Subset conditioning using variational autoencoder with a learnable tensor train induced prior A Aliper, A Zavoronkovs, A Zhebrak, D Polykovskiy, M Kuznetsov, ... US Patent 11,893,498, 2024 | | 2024 |
Entangled conditional adversarial autoencoder for drug discovery D Polykovskiy, A Kadurin, AM Aliper, A Zhebrak, A Zavoronkovs US Patent App. 18/336,818, 2023 | | 2023 |
Entangled conditional adversarial autoencoder for drug discovery D Polykovskiy, A Kadurin, AM Aliper, A Zhebrak, A Zavoronkovs US Patent 11,680,063, 2023 | | 2023 |
A Prior of a Googol Gaussians: a Tensor Ring Induced Prior for Generative Models (Supplementary) M Kuznetsov, D Polykovskiy, D Vetrov, A Zhebrak | | |