Feasibility of occurrence of different types of protonated base pairs in RNA: a quantum chemical study A Halder, S Halder, D Bhattacharyya, A Mitra Physical Chemistry Chemical Physics 16 (34), 18383-18396, 2014 | 40 | 2014 |
The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs A Halder, S Bhattacharya, A Datta, D Bhattacharyya, A Mitra Physical Chemistry Chemical Physics 17 (39), 26249-26263, 2015 | 34 | 2015 |
Estimating strengths of individual hydrogen bonds in RNA base pairs: toward a consensus between different computational approaches A Halder, D Data, PP Seelam, D Bhattacharyya, A Mitra ACS omega 4 (4), 7354-7368, 2019 | 25 | 2019 |
Role of guanidinium-carboxylate ion interaction in enzyme inhibition with implications for drug design AN Muttathukattil, S Srinivasan, A Halder, G Reddy The Journal of Physical Chemistry B 123 (44), 9302-9311, 2019 | 20 | 2019 |
Why does substitution of thymine by 6-ethynylpyridone increase the thermostability of DNA double helices? A Halder, A Datta, D Bhattacharyya, A Mitra The Journal of Physical Chemistry B 118 (24), 6586-6596, 2014 | 20 | 2014 |
RNABP COGEST: a resource for investigating functional RNAs S Bhattacharya, S Mittal, S Panigrahi, P Sharma, P SP, R Paul, S Halder, ... Database 2015, bav011, 2015 | 19 | 2015 |
Consequences of Mg 2+ binding on the geometry and stability of RNA base pairs A Halder, R Roy, D Bhattacharyya, A Mitra Physical Chemistry Chemical Physics 20 (34), 21934-21948, 2018 | 17 | 2018 |
On the nature of nucleobase stacking in RNA: a comprehensive survey of its structural variability and a systematic classification of associated interactions A Jhunjhunwala, Z Ali, S Bhattacharya, A Halder, A Mitra, P Sharma Journal of Chemical Information and Modeling 61 (3), 1470-1480, 2021 | 16 | 2021 |
Going beyond base-pairs: topology-based characterization of base-multiplets in RNA S Bhattacharya, A Jhunjhunwala, A Halder, D Bhattacharyya, A Mitra RNA 25 (5), 573-589, 2019 | 15 | 2019 |
How does mg2+ modulate the rna folding mechanism: A case study of the g: Cw: W trans basepair A Halder, R Roy, D Bhattacharyya, A Mitra Biophysical journal 113 (2), 277-289, 2017 | 12 | 2017 |
Mg2+ Sensing by an RNA Fragment: Role of Mg2+-Coordinated Water Molecules A Halder, S Kumar, O Valsson, G Reddy Journal of Chemical Theory and Computation 16 (10), 6702-6715, 2020 | 10 | 2020 |
Evidence for hidden involvement of N3-protonated guanine in RNA structure and function A Halder, S Vemuri, R Roy, J Katuri, D Bhattacharyya, A Mitra ACS omega 4 (1), 699-709, 2019 | 9 | 2019 |
Reverse Watson-Crick purine-purine base pairs—The Sharp-turn motif and other structural consequences in functional RNAs A Mittal, A Halder, S Bhattacharya, D Bhattacharyya, A Mitra bioRxiv, 098723, 2017 | 3 | 2017 |
Dopant induced modulation in the structure and electronic properties of Au 10 cluster LS Sidhu, A Halder, S Rai RSC advances 6 (90), 87115-87123, 2016 | 3 | 2016 |
A comprehensive survey on the nature of ring: ring nucleobase stacking interactions in RNA: occurrence, structural variability and classification of the associated contacts A Jhunjhunwala, Z Ali, S Bhattacharya, A Halder, A Mitra, P Sharma bioRxiv, 2020.02. 28.970798, 2020 | 1 | 2020 |
NextGen Voices: Quality mentoring L Segal, D Agarwal, KJ Isaacson, TB Oehmke, B Kumar, JS Chen, ... Science 362 (6410), 22-24, 2018 | 1 | 2018 |
Geometry, Energetics and Properties of Protonated and Deprotonated RNA Bases A Halder Centre for Computational Natural Sciences and Bioinformatics International …, 2013 | 1 | 2013 |
Local RNA Structure, Ion Hydration Shell and the Energy Barrier for Water Exchange from the Ion Hydration Shell Determine the Mechanism of Ion Condensation on Specific RNA Sites A Halder, S Kumar, S Habibullah, G Reddy bioRxiv, 2022.08. 15.503937, 2022 | | 2022 |
Occurrences of protonated base triples in RNA are determined by their cooperative binding energies and specific functional requirements A Halder, A Jhunjhunwala, D Bhattacharyya, A Mitra bioRxiv, 2021.01. 10.426061, 2021 | | 2021 |
Seeking career clarity N Van Rhijn, C Antoniou, K Burnette, A Christensen-Quick, M Lewinska, ... Science 368 (6486), 26-28, 2020 | | 2020 |