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Ching Chiek Koh, Gene
Ching Chiek Koh, Gene
Wellcome Trust Sanger Institute, University of Cambridge
在 cam.ac.uk 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
A repository of assays to quantify 10,000 human proteins by SWATH-MS
G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ...
Scientific data 1 (1), 1-15, 2014
4352014
Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps
T Guo, P Kouvonen, CC Koh, LC Gillet, WE Wolski, HL Röst, ...
Nature medicine 21 (4), 407-413, 2015
3762015
Characterizing mutational signatures in human cancer cell lines reveals episodic APOBEC mutagenesis
M Petljak, LB Alexandrov, JS Brammeld, S Price, DC Wedge, ...
Cell 176 (6), 1282-1294. e20, 2019
3602019
Analysis of major histocompatibility complex (MHC) immunopeptidomes using mass spectrometry
E Caron, DJ Kowalewski, CC Koh, T Sturm, H Schuster, R Aebersold
Molecular & Cellular Proteomics 14 (12), 3105-3117, 2015
2372015
A practical framework and online tool for mutational signature analyses show intertissue variation and driver dependencies
A Degasperi, TD Amarante, J Czarnecki, S Shooter, X Zou, D Glodzik, ...
Nature cancer 1 (2), 249-263, 2020
1912020
Mutational signatures: emerging concepts, caveats and clinical applications
G Koh, A Degasperi, X Zou, S Momen, S Nik-Zainal
Nature reviews cancer 21 (10), 619-637, 2021
1882021
Substitution mutational signatures in whole-genome–sequenced cancers in the UK population
A Degasperi, X Zou, T Dias Amarante, A Martinez-Martinez, GCC Koh, ...
Science 376 (6591), abl9283, 2022
1492022
An open-source computational and data resource to analyze digital maps of immunopeptidomes
E Caron, L Espona, DJ Kowalewski, H Schuster, N Ternette, A Alpízar, ...
Elife 4, e07661, 2015
1302015
A systematic CRISPR screen defines mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damage
X Zou, GCC Koh, AS Nanda, A Degasperi, K Urgo, TI Roumeliotis, ...
Nature cancer 2 (6), 643-657, 2021
1112021
Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach
P Meyer, T Cokelaer, D Chandran, KH Kim, PR Loh, G Tucker, M Lipson, ...
BMC systems biology 8, 1-18, 2014
812014
Substantial somatic genomic variation and selection for BCOR mutations in human induced pluripotent stem cells
FJ Rouhani, X Zou, P Danecek, C Badja, TD Amarante, G Koh, Q Wu, ...
Nature Genetics 54 (9), 1406-1416, 2022
522022
Quantitative proteome landscape of the NCI-60 cancer cell lines
T Guo, A Luna, VN Rajapakse, CC Koh, Z Wu, W Liu, Y Sun, H Gao, ...
Iscience 21, 664-680, 2019
492019
Predicting protein-ligand interactions based on bow-pharmacological space and Bayesian additive regression trees
L Li, CC Koh, D Reker, JB Brown, H Wang, NK Lee, H Liow, H Dai, ...
Scientific reports 9 (1), 7703, 2019
492019
Reproducible tissue homogenization and protein extraction for quantitative proteomics using micropestle-assisted pressure-cycling technology
S Shao, T Guo, V Gross, A Lazarev, CC Koh, S Gillessen, M Joerger, ...
Journal of proteome research 15 (6), 1821-1829, 2016
472016
Minimal sample requirement for highly multiplexed protein quantification in cell lines and tissues by PCT‐SWATH mass spectrometry
S Shao, T Guo, CC Koh, S Gillessen, M Joerger, W Jochum, R Aebersold
Proteomics 15 (21), 3711-3721, 2015
442015
Mutational signatures: experimental design and analytical framework
G Koh, X Zou, S Nik-Zainal
Genome biology 21, 1-13, 2020
332020
Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis
R Großeholz, CC Koh, N Veith, T Fiedler, M Strauss, B Olivier, BC Collins, ...
NPJ systems biology and applications 2 (1), 1-9, 2016
312016
Transcription-coupled repair and mismatch repair contribute towards preserving genome integrity at mononucleotide repeat tracts
I Georgakopoulos-Soares, G Koh, SE Momen, J Jiricny, M Hemberg, ...
Nature communications 11 (1), 1980, 2020
232020
FANCD2-associated nuclease 1 partially compensates for the lack of exonuclease 1 in mismatch repair
K Kratz, M Artola-Borán, S Kobayashi-Era, G Koh, G Oliveira, S Kobayashi, ...
Molecular and Cellular Biology, 2021
142021
Dissecting mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damage
X Zou, GCC Koh, AS Nanda, A Degasperi, K Urgo, TI Roumeliotis, ...
BiorXiv, 2020.08. 04.234245, 2020
92020
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