| Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline C Pauvert, M Buée, V Laval, V Edel-Hermann, L Fauchery, A Gautier, ... Fungal Ecology 41, 23-33, 2019 | 192 | 2019 |
| Biomonitoring for the 21st century: integrating next-generation sequencing into ecological network analysis SAP Derocles, DA Bohan, AJ Dumbrell, JJN Kitson, F Massol, C Pauvert, ... Advances in ecological research 58, 1-62, 2018 | 111 | 2018 |
| Maternal effects shape the seed mycobiome in Quercus petraea T Fort, C Pauvert, AE Zanne, O Ovaskainen, T Caignard, M Barret, ... New Phytologist 230 (4), 1594-1608, 2021 | 56 | 2021 |
| Microbial networks inferred from environmental DNA data for biomonitoring ecosystem change: Strengths and pitfalls D Barroso‐Bergada, C Pauvert, J Vallance, L Deliere, DA Bohan, M Buee, ... Molecular Ecology Resources 21 (3), 762-780, 2021 | 22 | 2021 |
| Microbial association networks give relevant insights into plant pathobiomes C Pauvert, T Fort, A Calonnec, J Faivre d’Arcier, E Chancerel, M Massot, ... BioRxiv, 2020.02. 21.958033, 2020 | 12 | 2020 |
| psadd: Additions to phyloseq package for microbiome analysis C Pauvert R Packag, Version 0.1 2, 2020 | 8 | 2020 |
| Toward FAIR representations of microbial interactions AR Pacheco, C Pauvert, D Kishore, D Segrè Msystems 7 (5), e00659-22, 2022 | 7 | 2022 |
| Leaf microbiome data for European beech (Fagus sylvatica) at the leaf and canopy scales collected in a gallery forest in South-West France T Fort, C Pauvert, E Chancerel, R Burlett, L Wingate, C Vacher Annals of Forest Science 80 (1), 14, 2023 | | 2023 |
| Comparaison et évaluation d’approches bioinformatiques et statistiques pour l'analyse du pathobiome des plantes cultivées C Pauvert Université de Bordeaux, 2019 | | 2019 |
| A metagenomic tool for cheese ecosystems AL Abraham, Q Cavaillé, T Guirimand, P Renault, S Derozier, C Pauvert, ... 17. European Conference on Computational Biology (ECCB 2018, Workshop …, 2018 | | 2018 |
| Food-Microbiomes Transfert, a shotgun metagenomic tool and a database to analyze cheese ecosystems T Guirimand, AL Abraham, S Derozier, C Pauvert, M Mariadassou, V Loux, ... Comité de programme, 6, 2017 | | 2017 |
| Food-Microbiomes Transfert, a shotgun metagenomic tool and a database to analyze cheese ecosystems AL Abraham, T Guirimand, C Pauvert, S Derozier, M Mariadassou, ... | | 2017 |
| Cheese ecosystems insights with shotgun metagenomics and a metadata extended genomics database. T Guirimand, C Pauvert, S Derozier, AL Abraham, M Mariadassou, V Loux, ... JOBIM 2016: Journées ouvertes de biologie informatique et mathématiques, np, 2016 | | 2016 |
| Food Microbiome-Transfert a database to characterize cheese ecosystems. T Guirimand, SS Derozier, C Pauvert, AL Abraham, V Loux, P Renault Journées Bioinformatique Inra, 2016 | | 2016 |
| Food Microbiome Transfert, une base de données pour charactériser les écosystèmes fromagers T Guirimand, S Derozier, C Pauvert, AL Abraham, V Loux, P Renault | | 2016 |
| Accurate taxonomy assignments in cheeses ecosystems via a metagenomic approach C Pauvert, AL Abraham, M Almeida, N Pons, M Mariadassou, E Achouri, ... JOBIM 2015-Journées Ouvertes Biologie Informatique Mathématiques, 1, 2015 | | 2015 |
| A shotgun metagenomic method to characterise low abundant species and assign precisely taxonomy in complex microbial ecosystems AL Abraham, M Almeida, N Pons, C Pauvert, S Schbath, P Renault ECCB'08: 7. European Conference on Computational Biology, np, 2014 | | 2014 |
