The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements. L Shi, LH Reid, WD Jones, R Shippy, JA Warrington, SC Baker, PJ Collins, ... Nature biotechnology 24 (9), 1151-1161, 2006 | 2418 | 2006 |
The let-7 microRNA represses cell proliferation pathways in human cells CD Johnson, A Esquela-Kerscher, G Stefani, M Byrom, K Kelnar, ... Cancer research 67 (16), 7713-7722, 2007 | 1583 | 2007 |
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Nature biotechnology 32 (9), 903-914, 2014 | 848 | 2014 |
Genome-scale microRNA and small interfering RNA screens identify small RNA modulators of TRAIL-induced apoptosis pathway D Ovcharenko, K Kelnar, C Johnson, N Leng, D Brown Cancer research 67 (22), 10782-10788, 2007 | 282 | 2007 |
Using RNA sample titrations to assess microarray platform performance and normalization techniques R Shippy, S Fulmer-Smentek, RV Jensen, WD Jones, PK Wolber, ... Nature biotechnology 24 (9), 1123-1131, 2006 | 212 | 2006 |
SNP genotyping defines complex gene-flow boundaries among African malaria vector mosquitoes DE Neafsey, MKN Lawniczak, DJ Park, SN Redmond, MB Coulibaly, ... Science 330 (6003), 514-517, 2010 | 188 | 2010 |
Nitrogen and potassium fertility affects Jalapeño pepper plant growth, pod yield, and pungency CD Johnson, DR Decoteau HortScience 31 (7), 1119-1123, 1996 | 170 | 1996 |
Evaluation of the coverage and depth of transcriptome by RNA-Seq in chickens Y Wang, N Ghaffari, CD Johnson, UM Braga-Neto, H Wang, R Chen, ... BMC bioinformatics 12, 1-7, 2011 | 161 | 2011 |
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models Nature biotechnology 28 (8), 827-838, 2010 | 131 | 2010 |
MIR-15, MIR-26, MIR-31, MIR-145, MIR-147, MIR-188, MIR-215, MIR-216 MIR-331, MMU-MIR-292-3P REGULATED GENES AND PATHWAYS AS TARGETS FOR THERAPEUTIC INTERVENTION A BADER, M BYROM, C JOHNSON, D BROWN, L PATRAWALA, ... WO Patent 2,008,036,776, 2008 | 120 | 2008 |
Analyzing Micro‐RNA Expression Using Microarrays TS Davison, CD Johnson, BF Andruss Methods in enzymology 411, 14-34, 2006 | 117 | 2006 |
Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture N Ghaffari, A Sanchez-Flores, R Doan, KD Garcia-Orozco, PL Chen, ... Scientific reports 4 (1), 7081, 2014 | 111 | 2014 |
Genomic signal processing and statistics ER Dougherty Hindawi Publishing Corporation, 2005 | 99 | 2005 |
MiR-124 regulated genes and pathways as targets for therapeutic intervention AG Bader, JF Wiggins, L Patrawala, K Kelnar, M Byrom, D Brown US Patent 8,071,562, 2011 | 95 | 2011 |
Modulation of RNA polymerase II phosphorylation downstream of pathogen perception orchestrates plant immunity F Li, C Cheng, F Cui, MVV de Oliveira, X Yu, X Meng, AC Intorne, ... Cell host & microbe 16 (6), 748-758, 2014 | 93 | 2014 |
Whole-Genome Sequencing and Genetic Variant Analysis of a Quarter Horse Mare R Doan, ND Cohen, J Sawyer, N Ghaffari, CD Johnson, SV Dindot BMC genomics 13 (1), 78, 2012 | 92 | 2012 |
Toxicogenomic Profile of 2,3,7,8-Tetrachlorodibenzo-p-Dioxin in the Murine Fetal Heart: Modulation of Cell Cycle and Extracellular Matrix Genes EA Thackaberry, Z Jiang, CD Johnson, KS Ramos, MK Walker Toxicological Sciences 88 (1), 231-241, 2005 | 87 | 2005 |
mir-21 Regulated genes and pathways as targets for therapeutic intervention AG Bader, M Byrom, CD Johnson, D Brown US Patent App. 12/120,388, 2009 | 82 | 2009 |
Horse Y chromosome assembly displays unique evolutionary features and putative stallion fertility genes JE Janečka, BW Davis, S Ghosh, N Paria, PJ Das, L Orlando, M Schubert, ... Nature communications 9 (1), 1-15, 2018 | 78 | 2018 |
Mir-34 regulated genes and pathways as targets for therapeutic intervention AG Bader, L Patrawala, JF Wiggins, MW Byrom, CD Johnson, D Brown US Patent App. 12/134,932, 2009 | 77 | 2009 |