Prediction of polyadenylation signals in human DNA sequences using nucleotide frequencies F Ahmed, M Kumar, GPS Raghava In Silico Biology 9 (3), 135-148, 2009 | 62 | 2009 |
A network-based analysis reveals the mechanism underlying vitamin D in suppressing cytokine storm and virus in SARS-CoV-2 infection F Ahmed Frontiers in immunology 11, 590459, 2020 | 58 | 2020 |
Designing of Highly Effective Complementary and Mismatch siRNAs for Silencing a Gene F Ahmed, GPS Raghava PloS One 6 (8), e23443, 2011 | 55 | 2011 |
Middle East respiratory syndrome: pathogenesis and therapeutic developments H Choudhry, MA Bakhrebah, WH Abdulaal, MA Zamzami, OA Baothman, ... Future virology 14 (4), 237-246, 2019 | 52 | 2019 |
Prediction of guide strand of microRNAs from its sequence and secondary structure F Ahmed, H Ansari, G Raghava BMC Bioinformatics 10 (1), 105, 2009 | 50 | 2009 |
PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors F Ahmed, R Kaundal, GPS Raghava BMC Bioinformatics 14 (S14), S9, 2013 | 48 | 2013 |
HIVsirDB: A Database of HIV Inhibiting siRNAs A Tyagi*, F Ahmed*, N Thakur, A Sharma, GPS Raghava, M Kumar PloS One 6 (10), e25917, 2011 | 48 | 2011 |
pssRNAit-a web server for designing effective and specific plant siRNAs with genome-wide off-target assessment F Ahmed, M Senthil-Kumar, X Dai, VS Ramu, S Lee, KS Mysore, PX Zhao Plant Physiology, 2020 | 46 | 2020 |
Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction in Arabidopsis F Ahmed, M Senthil-Kumar, S Lee, X Dai, KS Mysore, PX Zhao RNA Biology, 00-00, 2015 | 41 | 2015 |
Integrated network analysis reveals FOXM1 and MYBL2 as key regulators of cell proliferation in non-small cell lung cancer F Ahmed Frontiers in Oncology 9, 1011, 2019 | 40 | 2019 |
Investigating the pathogenic SNPs in BLM helicase and their biological consequences by computational approach FA Alzahrani*, F Ahmed*, M Sharma*, M Rehan, M Mahfuz, MN Baeshen, ... Scientific Reports 10, 2020 | 31 | 2020 |
A computational approach identified andrographolide as a potential drug for suppressing COVID-19-induced cytokine storm M Rehan*, F Ahmed*, SM Howladar, MY Refai, HM Baeissa, TA Zughaibi, ... Frontiers in Immunology, 2021 | 30 | 2021 |
Mining functional elements in messenger RNAs: overview, challenges, and perspectives F Ahmed, VA Benedito, PX Zhao Frontiers in Plant Science 2, 84, 2011 | 29 | 2011 |
A molecular bridge: connecting type 2 diabetes and Alzheimer’s disease F Ahmed, J Asghar Ansari, Z Eqbal Ansari, Q Alam, S Hua Gan, ... CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS …, 2014 | 26 | 2014 |
A Comprehensive Analysis of cis-Acting RNA Elements in the SARS-CoV-2 Genome by a Bioinformatics Approach F Ahmed, M Sharma, AA Al-Ghamdi, SM Al-Yami, AM Al-Salami, MY Refai, ... Frontiers in genetics 11, 572702, 2020 | 16 | 2020 |
Bioinformatics Tools for Achieving Better Gene Silencing in Plants F Ahmed, X Dai, PX Zhao Springer Science and Business Media New York, 2015 | 12 | 2015 |
The histone H3K27me3 demethylases KDM6A/B resist anoikis and transcriptionally regulates stemness related genes M Razeeth, M Zamzami, H Choudhry, F Ahmed, MI Khan Frontiers in Cell and Developmental Biology, 2022 | 11 | 2022 |
Diversity Profiling of Associated Bacteria from the Soils of Stress Tolerant Plants from Seacoast of Jeddah, Saudi Arabia MN Baeshen, TAA Moussa, F Ahmed, AA Abulfaraj, RS Jalal, MA Majeed, ... Applied Ecology and Environmental Research 18 (6), 8217-8231, 2020 | 8 | 2020 |
A comprehensive analysis of isomirs and their targets using high-throughput sequencing data for Arabidopsis thaliana F Ahmed, P Zhao Journal of Natural Science, Biology and Medicine 2 (3), 2011 | 8 | 2011 |
Molecular approaches in cancer E Ahmad, A Ali, AK Sharma, F Ahmed, GM Dar, AM Singh, A Kumar, ... Clinica Chimica Acta 537, 60-73, 2022 | 7 | 2022 |