The genome of the social amoeba Dictyostelium discoideum L Eichinger, JA Pachebat, G Glöckner, MA Rajandream, R Sucgang, ... Nature 435 (7038), 43-57, 2005 | 1655 | 2005 |
Implications of the hybrid epithelial/mesenchymal phenotype in metastasis MK Jolly, M Boareto, B Huang, D Jia, M Lu, E Ben-Jacob, JN Onuchic, ... Frontiers in oncology 5, 155, 2015 | 743 | 2015 |
MicroRNA-based regulation of epithelial–hybrid–mesenchymal fate determination M Lu, MK Jolly, H Levine, JN Onuchic, E Ben-Jacob Proceedings of the National Academy of Sciences 110 (45), 18144-18149, 2013 | 515 | 2013 |
Elucidating cancer metabolic plasticity by coupling gene regulation with metabolic pathways D Jia, M Lu, KH Jung, JH Park, L Yu, JN Onuchic, BA Kaipparettu, ... Proceedings of the National Academy of Sciences 116 (9), 3909-3918, 2019 | 251 | 2019 |
Modeling the genetic regulation of cancer metabolism: interplay between glycolysis and oxidative phosphorylation L Yu, M Lu, D Jia, J Ma, E Ben-Jacob, H Levine, BA Kaipparettu, ... Cancer research 77 (7), 1564-1574, 2017 | 234 | 2017 |
Crystal structure of unliganded influenza B virus hemagglutinin Q Wang, F Cheng, M Lu, X Tian, J Ma Journal of virology 82 (6), 3011-3020, 2008 | 215 | 2008 |
OPUS-PSP: an orientation-dependent statistical all-atom potential derived from side-chain packing M Lu, AD Dousis, J Ma Journal of molecular biology 376 (1), 288-301, 2008 | 207 | 2008 |
Towards elucidating the connection between epithelial–mesenchymal transitions and stemness MK Jolly, B Huang, M Lu, SA Mani, H Levine, E Ben-Jacob Journal of The Royal Society Interface 11 (101), 20140962, 2014 | 183 | 2014 |
The role of shape in determining molecular motions M Lu, J Ma Biophysical journal 89 (4), 2395-2401, 2005 | 163 | 2005 |
Jagged–Delta asymmetry in Notch signaling can give rise to a Sender/Receiver hybrid phenotype M Boareto, MK Jolly, M Lu, JN Onuchic, C Clementi, E Ben-Jacob Proceedings of the National Academy of Sciences 112 (5), E402-E409, 2015 | 161 | 2015 |
Interrogating the topological robustness of gene regulatory circuits by randomization B Huang, M Lu, D Jia, E Ben-Jacob, H Levine, JN Onuchic PLoS computational biology 13 (3), e1005456, 2017 | 150 | 2017 |
Tristability in cancer-associated microRNA-TF chimera toggle switch M Lu, MK Jolly, R Gomoto, B Huang, J Onuchic, E Ben-Jacob The journal of physical chemistry B 117 (42), 13164-13174, 2013 | 121 | 2013 |
A new method for coarse-grained elastic normal-mode analysis M Lu, B Poon, J Ma Journal of chemical theory and computation 2 (3), 464-471, 2006 | 105 | 2006 |
OPUS‐Ca: A knowledge‐based potential function requiring only Cα positions Y Wu, M Lu, M Chen, J Li, J Ma Protein science 16 (7), 1449-1463, 2007 | 103 | 2007 |
The three-way switch operation of Rac1/ RhoA GTPase-based circuit controlling amoeboid-hybrid-mesenchymal transition B Huang, M Lu, MK Jolly, I Tsarfaty, J Onuchic, E Ben-Jacob Scientific Reports 4, 6449, 2014 | 96 | 2014 |
Distinguishing mechanisms underlying EMT tristability D Jia, MK Jolly, SC Tripathi, P Den Hollander, B Huang, M Lu, M Celiktas, ... Cancer convergence 1, 1-19, 2017 | 82 | 2017 |
Breast cancer tumorigenicity is dependent on high expression levels of NAF-1 and the lability of its Fe-S clusters M Darash-Yahana, Y Pozniak, M Lu, YS Sohn, O Karmi, S Tamir, F Bai, ... Proceedings of the National Academy of Sciences 113 (39), 10890-10895, 2016 | 76 | 2016 |
Periodic, quasi-periodic and chaotic dynamics in simple gene elements with time delays Y Suzuki, M Lu, E Ben-Jacob, JN Onuchic Scientific reports 6 (1), 21037, 2016 | 71 | 2016 |
OPUS‐Rota: A fast and accurate method for side‐chain modeling M Lu, AD Dousis, J Ma Protein Science 17 (9), 1576-1585, 2008 | 68 | 2008 |
Construction of an effective landscape for multistate genetic switches M Lu, J Onuchic, E Ben-Jacob Physical review letters 113 (7), 078102, 2014 | 67 | 2014 |