From single drug targets to synergistic network pharmacology in ischemic stroke AI Casas, AA Hassan, SJ Larsen, V Gomez-Rangel, M Elbatreek, ... Proceedings of the National Academy of Sciences 116 (14), 7129-7136, 2019 | 179 | 2019 |
DeepCLIP: predicting the effect of mutations on protein–RNA binding with deep learning AGB Grønning, TK Doktor, SJ Larsen, USS Petersen, LL Holm, GH Bruun, ... Nucleic acids research 48 (13), 7099-7118, 2020 | 81 | 2020 |
E. coli gene regulatory networks are inconsistent with gene expression data SJ Larsen, R Röttger, HHHW Schmidt, J Baumbach Nucleic acids research 47 (1), 85-92, 2018 | 39 | 2018 |
Genomic profiling in ovarian cancer retreated with platinum based chemotherapy presented homologous recombination deficiency and copy number imbalances of CCNE1 and RB1 genes AABA da Costa, LM do Canto, SJ Larsen, ARG Ribeiro, CE Stecca, ... BMC cancer 19 (1), 422, 2019 | 33 | 2019 |
CoNVaQ: a web tool for copy number variation-based association studies SJ Larsen, LM do Canto, SR Rogatto, J Baumbach BMC genomics 19 (1), 369, 2018 | 24 | 2018 |
Inflammatory Breast Cancer: Clinical Implications of Genomic Alterations and Mutational Profiling FLC Faldoni, RAR Villacis, LM Canto, CE Fonseca-Alves, SS Cury, ... Cancers 12 (10), 2816, 2020 | 22 | 2020 |
Increased levels of genomic instability and mutations in homologous recombination genes in locally advanced rectal carcinomas LM Canto, SJ Larsen, BE Catin Kupper, MDFS Begnami, ... Frontiers in oncology 9, 395, 2019 | 22 | 2019 |
Comprehensive Genomic Profiling of Androgen-Receptor-Negative Canine Prostate Cancer R Laufer-Amorim, CE Fonseca-Alves, RAR Villacis, SAD Linde, C Marcio, ... International Journal of Molecular Sciences 20 (7), 1555, 2019 | 22 | 2019 |
The Selection of a Hepatocyte Cell Line Susceptible to Plasmodium falciparum Sporozoite Invasion That Is Associated With Expression of Glypican-3 RE Tweedell, D Tao, T Hamerly, TM Robinson, S Larsen, AGB Grønning, ... Frontiers in microbiology 10, 127, 2019 | 20 | 2019 |
De Novo and Supervised Endophenotyping Using Network-Guided Ensemble Learning SJ Larsen, HHHW Schmidt, J Baumbach Systems Medicine 3 (1), 8-21, 2020 | 16 | 2020 |
A simulated annealing algorithm for maximum common edge subgraph detection in biological networks SJ Larsen, FG Alkærsig, HJ Ditzel, I Jurisica, N Alcaraz, J Baumbach Proceedings of the Genetic and Evolutionary Computation Conference 2016, 341-348, 2016 | 10 | 2016 |
CytoMCS: a multiple maximum common subgraph detection tool for Cytoscape SJ Larsen, J Baumbach Journal of integrative bioinformatics 14 (2), 2017 | 8 | 2017 |
Hierarchical association of COPD to principal genetic components of biological systems DE Carlin, SJ Larsen, V Sirupurapu, MH Cho, EK Silverman, J Baumbach, ... Plos one 18 (5), e0286064, 2023 | | 2023 |
Finding patterns in complex biomedical data using networks and molecular profiling SJ Larsen University of Southern Denmark, Faculty of Science, 2019 | | 2019 |
Mutational profile and genomic instability according to response to therapy in rectal carcinomas LM do Canto, SJ Larsen, BEC Kupper, MDF de Souza Begnami, CS Neto, ... Cancer Research 78 (13 Supplement), 5360-5360, 2018 | | 2018 |
Using neural networks to predict effects of mutations on protein binding AGB Gronning, TK Doktor, SJ Larsen, GH Bruun, J Baumbach, ... 50th European Human Genetics Conference 26, 363-364, 2018 | | 2018 |
EASyM Europe 2018 Utrecht Conference Big Data-Transition to Practice 7th–9th November 2018 Utrecht, Netherlands Abstracts PJ Sterk, J Baumbach, M Moškon, T Cvitanović Tomaš, M Mraz, ... Systems Medicine 2 (1), A-1-A-18, 0 | | |