Comprehensive mapping of long-range interactions reveals folding principles of the human genome E Lieberman-Aiden, NL Van Berkum, L Williams, M Imakaev, T Ragoczy, ... science 326 (5950), 289-293, 2009 | 8649 | 2009 |
Protein complexes and functional modules in molecular networks V Spirin, LA Mirny Proceedings of the national Academy of sciences 100 (21), 12123-12128, 2003 | 1816 | 2003 |
Formation of chromosomal domains by loop extrusion G Fudenberg, M Imakaev, C Lu, A Goloborodko, N Abdennur, LA Mirny Cell reports 15 (9), 2038-2049, 2016 | 1755 | 2016 |
Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization EP Nora, A Goloborodko, AL Valton, JH Gibcus, A Uebersohn, ... Cell 169 (5), 930-944. e22, 2017 | 1522 | 2017 |
Iterative correction of Hi-C data reveals hallmarks of chromosome organization M Imakaev, G Fudenberg, RP McCord, N Naumova, A Goloborodko, ... Nature methods 9 (10), 999-1003, 2012 | 1360 | 2012 |
HiGlass: web-based visual exploration and analysis of genome interaction maps P Kerpedjiev, N Abdennur, F Lekschas, C McCallum, K Dinkla, H Strobelt, ... Genome biology 19, 1-12, 2018 | 1332 | 2018 |
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data J Dekker, MA Marti-Renom, LA Mirny Nature Reviews Genetics 14 (6), 390-403, 2013 | 1190 | 2013 |
Two independent modes of chromatin organization revealed by cohesin removal W Schwarzer, N Abdennur, A Goloborodko, A Pekowska, G Fudenberg, ... Nature 551 (7678), 51-56, 2017 | 1060 | 2017 |
Organization of the mitotic chromosome N Naumova, M Imakaev, G Fudenberg, Y Zhan, BR Lajoie, LA Mirny, ... Science 342 (6161), 948-953, 2013 | 1021 | 2013 |
Cooler: scalable storage for Hi-C data and other genomically labeled arrays N Abdennur, LA Mirny Bioinformatics 36 (1), 311-316, 2020 | 1011 | 2020 |
The 3D genome as moderator of chromosomal communication J Dekker, L Mirny Cell 164 (6), 1110-1121, 2016 | 892 | 2016 |
Super-resolution imaging reveals distinct chromatin folding for different epigenetic states AN Boettiger, B Bintu, JR Moffitt, S Wang, BJ Beliveau, G Fudenberg, ... Nature 529 (7586), 418-422, 2016 | 846 | 2016 |
Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition IM Flyamer, J Gassler, M Imakaev, HB Brandão, SV Ulianov, N Abdennur, ... Nature 544 (7648), 110-114, 2017 | 698 | 2017 |
The 4D nucleome project J Dekker, AS Belmont, M Guttman, VO Leshyk, JT Lis, S Lomvardas, ... Nature 549 (7671), 219-226, 2017 | 659 | 2017 |
A pathway for mitotic chromosome formation JH Gibcus, K Samejima, A Goloborodko, I Samejima, N Naumova, ... Science 359 (6376), eaao6135, 2018 | 652 | 2018 |
The fractal globule as a model of chromatin architecture in the cell LA Mirny Chromosome research 19, 37-51, 2011 | 646 | 2011 |
High-resolution mapping of the spatial organization of a bacterial chromosome TBK Le, MV Imakaev, LA Mirny, MT Laub Science 342 (6159), 731-734, 2013 | 616 | 2013 |
Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential M Slutsky, LA Mirny Biophysical journal 87 (6), 4021-4035, 2004 | 597 | 2004 |
Chromatin organization by an interplay of loop extrusion and compartmental segregation J Nuebler, G Fudenberg, M Imakaev, N Abdennur, L Mirny Biophysical Journal 114 (3), 30a, 2018 | 596 | 2018 |
Hi-C: a method to study the three-dimensional architecture of genomes. NL Van Berkum, E Lieberman-Aiden, L Williams, M Imakaev, A Gnirke, ... JoVE (Journal of Visualized Experiments), e1869, 2010 | 574 | 2010 |