A consistent phylogenetic backbone for the fungi I Ebersberger, R de Matos Simoes, A Kupczok, M Gube, E Kothe, K Voigt, ... Molecular Biology and Evolution 29 (5), 1319-1334, 2012 | 154 | 2012 |
A phage protein aids bacterial symbionts in eukaryote immune evasion MT Jahn, K Arkhipova, SM Markert, C Stigloher, T Lachnit, L Pita, ... Cell Host & Microbe 26 (4), 542-550. e5, 2019 | 122 | 2019 |
Functional diversity enables multiple symbiont strains to coexist in deep-sea mussels R Ansorge, S Romano, L Sayavedra, MÁG Porras, A Kupczok, ... Nature microbiology 4 (12), 2487-2497, 2019 | 91 | 2019 |
Rates of Mutation and Recombination in Siphoviridae Phage Genome Evolution over Three Decades A Kupczok, H Neve, KD Huang, MP Hoeppner, KJ Heller, CMAP Franz, ... Molecular Biology and Evolution 35 (5), 1147-1159, 2018 | 78 | 2018 |
Accuracy of phylogeny reconstruction methods combining overlapping gene data sets A Kupczok, HA Schmidt, A Von Haeseler Algorithms for Molecular Biology 5, 1-17, 2010 | 75 | 2010 |
Disentangling the genetic basis of rhizosphere microbiome assembly in tomato BO Oyserman, SS Flores, T Griffioen, X Pan, E Van Der Wijk, L Pronk, ... Nature communications 13 (1), 3228, 2022 | 68 | 2022 |
Segregational drift and the interplay between plasmid copy number and evolvability J Ilhan, A Kupczok, C Woehle, T Wein, NF Hülter, P Rosenstiel, G Landan, ... Molecular biology and evolution 36 (3), 472-486, 2019 | 59 | 2019 |
Horizontally transmitted symbiont populations in deep-sea mussels are genetically isolated DR Picazo, T Dagan, R Ansorge, JM Petersen, N Dubilier, A Kupczok The ISME Journal 13, 2954–2968, 2019 | 46 | 2019 |
The contribution of genetic recombination to CRISPR array evolution A Kupczok, G Landan, T Dagan Genome biology and evolution 7 (7), 1925-1939, 2015 | 38 | 2015 |
Methanosarcina spherical virus, a novel archaeal lytic virus targeting Methanosarcina strains K Weidenbach, L Nickel, H Neve, OS Alkhnbashi, S Künzel, A Kupczok, ... Journal of Virology 91 (22), 10.1128/jvi. 00955-17, 2017 | 36 | 2017 |
An exact algorithm for the geodesic distance between phylogenetic trees A Kupczok, AV Haeseler, S Klaere Journal of Computational Biology 15 (6), 577-591, 2008 | 33 | 2008 |
Plasticity first: molecular signatures of a complex morphological trait in filamentous cyanobacteria R Koch, A Kupczok, K Stucken, J Ilhan, K Hammerschmidt, T Dagan BMC Evolutionary Biology 17, 1-11, 2017 | 32 | 2017 |
Recombination Signal in Mycobacterium tuberculosis Stems from Reference-guided Assemblies and Alignment Artefacts M Godfroid, T Dagan, A Kupczok Genome biology and evolution 10 (8), 1920-1926, 2018 | 27 | 2018 |
Insertion and deletion evolution reflects antibiotics selection pressure in a Mycobacterium tuberculosis outbreak M Godfroid, T Dagan, M Merker, TA Kohl, R Diel, FP Maurer, S Niemann, ... PLoS Pathogens 16 (9), e1008357, 2020 | 24 | 2020 |
Marine genomics: News and views ÂM Ribeiro, AD Foote, A Kupczok, B Frazão, MT Limborg, R Piñeiro, ... Marine genomics 31, 1-8, 2017 | 24 | 2017 |
Split-based computation of majority-rule supertrees A Kupczok BMC evolutionary biology 11, 1-13, 2011 | 23 | 2011 |
Characterization of the lytic archaeal virus Drs3 infecting Methanobacterium formicicum S Wolf, MA Fischer, A Kupczok, J Reetz, T Kern, RA Schmitz, M Rother Archives of virology 164, 667-674, 2019 | 18 | 2019 |
Probabilistic models for CRISPR spacer content evolution A Kupczok, JP Bollback BMC evolutionary biology 13, 1-18, 2013 | 18 | 2013 |
Determinants of simulated RNA evolution A Kupczok, P Dittrich Journal of theoretical biology 238 (3), 726-735, 2006 | 16 | 2006 |
Complete genome sequence of the novel phage MG-B1 infecting Bacillus weihenstephanensis RAF Redondo, A Kupczok, G Stift, JP Bollback Genome announcements 1 (3), 10.1128/genomea. 00216-13, 2013 | 15 | 2013 |