CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides P Agrawal, S Bhalla, SS Usmani, S Singh, K Chaudhary, GPS Raghava, ... Nucleic acids research 44 (D1), D1098-D1103, 2016 | 295 | 2016 |
SATPdb: a database of structurally annotated therapeutic peptides S Singh, K Chaudhary, SK Dhanda, S Bhalla, SS Usmani, A Gautam, ... Nucleic acids research 44 (D1), D1119-D1126, 2016 | 180 | 2016 |
In Silico Approach for Prediction of Antifungal Peptides P Agrawal, S Bhalla, K Chaudhary, R Kumar, M Sharma, GPS Raghava Frontiers in microbiology 9, 323, 2018 | 131 | 2018 |
A critical role for fas-mediated off-target tumor killing in T cell immunotherapy R Upadhyay, JA Boiarsky, G Pantsulaia, J Svensson-Arvelund, MJ Lin, ... Cancer Discovery, 2020 | 128 | 2020 |
Gene expression-based biomarkers for discriminating early and late stage of clear cell renal cancer S Bhalla, K Chaudhary, R Kumar, M Sehgal, H Kaur, S Sharma, ... Scientific reports 7 (1), 44997, 2017 | 97 | 2017 |
Differential expression of structural genes for the late phase of phytic acid biosynthesis in developing seeds of wheat (Triticum aestivum L.) KK Bhati, S Aggarwal, S Sharma, S Mantri, SP Singh, S Bhalla, J Kaur, ... Plant Science 224, 74-85, 2014 | 84 | 2014 |
Prediction of antitubercular peptides from sequence information using ensemble classifier and hybrid features SS Usmani, S Bhalla, GPS Raghava Frontiers in pharmacology 9, 954, 2018 | 66 | 2018 |
Prediction and analysis of skin cancer progression using genomics profiles of patients S Bhalla, H Kaur, A Dhall, GPS Raghava Scientific Reports 9 (1), 15790, 2019 | 63 | 2019 |
Patient Similarity Network of Newly Diagnosed Multiple Myeloma Identifies Patient Sub-groups with Distinct Genetic Features and Clinical Implications S Bhalla, D Melnekoff, J Keats, K Onel, J Sawyer, D Madduri, J Richter, ... SCIENCE ADVANCES (Accepted), 2020 | 60 | 2020 |
In silico tools and databases for designing peptide-based vaccine and drugs SS Usmani, R Kumar, S Bhalla, V Kumar, GPS Raghava Advances in protein chemistry and structural biology 112, 221-263, 2018 | 58 | 2018 |
Prediction of cell-penetrating potential of modified peptides containing natural and chemically modified residues V Kumar, P Agrawal, R Kumar, S Bhalla, SS Usmani, GC Varshney, ... Frontiers in microbiology 9, 725, 2018 | 57 | 2018 |
FermFooDb: A database of bioactive peptides derived from fermented foods A Chaudhary, S Bhalla, S Patiyal, GPS Raghava, G Sahni Heliyon 7 (4), 2021 | 49 | 2021 |
Classification of early and late stage liver hepatocellular carcinoma patients from their genomics and epigenomics profiles H Kaur, S Bhalla, GPS Raghava PloS one 14 (9), e0221476, 2019 | 44 | 2019 |
Crowdsourcing digital health measures to predict Parkinson’s disease severity: the Parkinson’s Disease Digital Biomarker DREAM Challenge SK Sieberts, J Schaff, M Duda, BÁ Pataki, M Sun, P Snyder, JF Daneault, ... NPJ digital medicine 4 (1), 53, 2021 | 43 | 2021 |
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020 | 41 | 2020 |
Computing skin cutaneous melanoma outcome from the HLA-alleles and clinical characteristics A Dhall, S Patiyal, H Kaur, S Bhalla, C Arora, GPS Raghava Frontiers in genetics 11, 221, 2020 | 35 | 2020 |
CancerPDF: a repository of cancer-associated peptidome found in human biofluids S Bhalla, R Verma, H Kaur, R Kumar, SS Usmani, S Sharma, ... Scientific reports 7 (1), 1511, 2017 | 30 | 2017 |
CancerLivER: a database of liver cancer gene expression resources and biomarkers H Kaur, S Bhalla, D Kaur, GPS Raghava Database 2020, baaa012, 2020 | 27 | 2020 |
Community assessment of the predictability of cancer protein and phosphoprotein levels from genomics and transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell systems 11 (2), 186-195. e9, 2020 | 24 | 2020 |
Artificial Intelligence for Precision Oncology S Bhalla, A Laganà Computational Methods for Precision Oncology 1361, 249-268, 2022 | 21 | 2022 |