Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients A Zehir, R Benayed, RH Shah, A Syed, S Middha, HR Kim, P Srinivasan, ... Nature medicine 23 (6), 703-713, 2017 | 3035 | 2017 |
REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants NM Ioannidis, JH Rothstein, V Pejaver, S Middha, SK McDonnell, ... The American Journal of Human Genetics 99 (4), 877-885, 2016 | 1937 | 2016 |
The Genomic Landscape of Endocrine-Resistant Advanced Breast Cancers P Razavi, MT Chang, G Xu, C Bandlamudi, DS Ross, N Vasan, Y Cai, ... Cancer cell 34 (3), 427-438. e6, 2018 | 833 | 2018 |
Clinical sequencing defines the genomic landscape of metastatic colorectal cancer R Yaeger, WK Chatila, MD Lipsyc, JF Hechtman, A Cercek, ... Cancer cell 33 (1), 125-136. e3, 2018 | 717 | 2018 |
Analysis of the prevalence of microsatellite instability in prostate cancer and response to immune checkpoint blockade W Abida, ML Cheng, J Armenia, S Middha, KA Autio, HA Vargas, ... JAMA oncology 5 (4), 471-478, 2019 | 585 | 2019 |
Microsatellite instability is associated with the presence of Lynch syndrome pan-cancer A Latham, P Srinivasan, Y Kemel, J Shia, C Bandlamudi, D Mandelker, ... Journal of clinical oncology 37 (4), 286-295, 2019 | 532 | 2019 |
Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides JB Egan, CX Shi, W Tembe, A Christoforides, A Kurdoglu, S Sinari, ... Blood, The Journal of the American Society of Hematology 120 (5), 1060-1066, 2012 | 512 | 2012 |
Genetic diversity of tumors with mismatch repair deficiency influences anti–PD-1 immunotherapy response R Mandal, RM Samstein, KW Lee, JJ Havel, H Wang, C Krishna, ... Science 364 (6439), 485-491, 2019 | 473 | 2019 |
The human gut microbiome: current knowledge, challenges, and future directions M Dave, PD Higgins, S Middha, KP Rioux Translational Research 160 (4), 246-257, 2012 | 447 | 2012 |
Mutations in DNMT1 cause hereditary sensory neuropathy with dementia and hearing loss CJ Klein, MV Botuyan, Y Wu, CJ Ward, GA Nicholson, S Hammans, ... Nature genetics 43 (6), 595-600, 2011 | 437 | 2011 |
Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma MJ Borad, MD Champion, JB Egan, WS Liang, R Fonseca, AH Bryce, ... PLoS genetics 10 (2), e1004135, 2014 | 363 | 2014 |
MAP-RSeq: Mayo analysis pipeline for RNA sequencing KR Kalari, AA Nair, JD Bhavsar, DR O’Brien, JI Davila, MA Bockol, J Nie, ... BMC bioinformatics 15, 1-11, 2014 | 338 | 2014 |
Reliable Pan-Cancer Microsatellite Instability Assessment by Using Targeted Next-Generation Sequencing Data S Middha, L Zhang, K Nafa, G Jayakumaran, D Wong, HR Kim, ... JCO Precision Oncology 1, 1-17, 2017 | 336 | 2017 |
Genetic Predictors of Response to Systemic Therapy in Esophagogastric CancerGenomic Biomarkers in Esophagogastric Adenocarcinoma YY Janjigian, F Sanchez-Vega, P Jonsson, WK Chatila, JF Hechtman, ... Cancer discovery 8 (1), 49-58, 2018 | 335 | 2018 |
Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants F Zou, HS Chai, CS Younkin, M Allen, J Crook, VS Pankratz, ... PLoS genetics 8 (6), e1002707, 2012 | 257 | 2012 |
Reliable detection of mismatch repair deficiency in colorectal cancers using mutational load in next-generation sequencing panels ZK Stadler, F Battaglin, S Middha, JF Hechtman, C Tran, A Cercek, ... Journal of Clinical Oncology 34 (18), 2141, 2016 | 244 | 2016 |
The genetic landscape of endometrial clear cell carcinomas DF DeLair, KA Burke, P Selenica, RS Lim, SN Scott, S Middha, ... The Journal of pathology 243 (2), 230-241, 2017 | 218 | 2017 |
3'tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer YW Asmann, EW Klee, EA Thompson, EA Perez, S Middha, AL Oberg, ... BMC genomics 10, 1-11, 2009 | 202 | 2009 |
CAP-miRSeq: a comprehensive analysis pipeline for microRNA sequencing data Z Sun, J Evans, A Bhagwate, S Middha, M Bockol, H Yan, JP Kocher BMC genomics 15 (1), 1-10, 2014 | 182 | 2014 |
Novel late-onset Alzheimer disease loci variants associate with brain gene expression M Allen, F Zou, HS Chai, CS Younkin, J Crook, VS Pankratz, ... Neurology 79 (3), 221-228, 2012 | 178 | 2012 |