Constrained allocation flux balance analysis M Mori, T Hwa, OC Martin, A De Martino, E Marinari PLoS computational biology 12 (6), e1004913, 2016 | 180 | 2016 |
Quantifying the benefit of a proteome reserve in fluctuating environments M Mori, S Schink, DW Erickson, U Gerland, T Hwa Nature communications 8 (1), 1225, 2017 | 128 | 2017 |
From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions M Mori, Z Zhang, A Banaei‐Esfahani, JB Lalanne, H Okano, BC Collins, ... Molecular systems biology 17 (5), e9536, 2021 | 90 | 2021 |
Disruption of transcription–translation coordination in Escherichia coli leads to premature transcriptional termination M Zhu, M Mori, T Hwa, X Dai Nature microbiology 4 (12), 2347-2356, 2019 | 81* | 2019 |
Principles of gene regulation quantitatively connect DNA to RNA and proteins in bacteria R Balakrishnan, M Mori, I Segota, Z Zhang, R Aebersold, C Ludwig, ... Science 378 (6624), eabk2066, 2022 | 68 | 2022 |
Uniform sampling of steady states in metabolic networks: heterogeneous scales and rounding D De Martino, M Mori, V Parisi PLoS ONE 10 (4), e0122670, 2013 | 66 | 2013 |
Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks D De Martino, F Capuani, M Mori, A De Martino, E Marinari Metabolites 3 (4), 946-966, 2013 | 58 | 2013 |
A yield-cost tradeoff governs Escherichia coli's decision between fermentation and respiration in carbon-limited growth M Mori, E Marinari, A De Martino npj Systems Biology and Applications 5 (1), 16, 2019 | 54 | 2019 |
Cellular perception of growth rate and the mechanistic origin of bacterial growth law C Wu, R Balakrishnan, N Braniff, M Mori, G Manzanarez, Z Zhang, T Hwa Proceedings of the National Academy of Sciences 119 (20), e2201585119, 2022 | 44 | 2022 |
On the optimality of the enzyme–substrate relationship in bacteria H Dourado, M Mori, T Hwa, MJ Lercher PLoS biology 19 (10), e3001416, 2021 | 30 | 2021 |
Metabolic complementation in bacterial communities: necessary conditions and optimality M Mori, M Ponce-de-León, J Peretó, F Montero Frontiers in Microbiology 7, 1553, 2016 | 19 | 2016 |
Enzyme expression kinetics by Escherichia coli during transition from rich to minimal media depends on proteome reserves C Wu, M Mori, M Abele, A Banaei-Esfahani, Z Zhang, H Okano, ... Nature Microbiology 8 (2), 347-359, 2023 | 13 | 2023 |
Glue function of optimally and overdoped cuprates from inversion of the Raman spectra L Fanfarillo, M Mori, M Campetella, M Grilli, S Caprara Journal of Physics: Condensed Matter 28 (6), 065701, 2016 | 9 | 2016 |
Determinism and contingency shape metabolic complementation in an endosymbiotic consortium M Ponce-de-León, D Tamarit, J Calle-Espinosa, M Mori, A Latorre, ... Frontiers in Microbiology 8, 2290, 2017 | 8 | 2017 |
Functional Decomposition of Metabolism allows a system-level quantification of fluxes and protein allocation towards specific metabolic functions M Mori, C Cheng, BR Taylor, H Okano, T Hwa Nature Communications 14 (1), 4161, 2023 | 6 | 2023 |
Spatiotemporal development of growth and death zones in expanding bacterial colonies driven by emergent nutrient dynamics H Kannan, P Sun, T Çağlar, P Yao, BR Taylor, K Sahu, D Ge, M Mori, ... bioRxiv, 2023.08. 27.554977, 2023 | 3 | 2023 |
The Δ-statistics of uncoventional quarkonium-like resonances ENM Cirillo, M Mori, AD Polosa Physics Letters B, 2011 | 3 | 2011 |
Proteome partitioning constraints in long-term laboratory evolution M Mori, V Patsalo, C Euler, JR Williamson, M Scott Nature Communications 15 (1), 4087, 2024 | 1 | 2024 |
Determining the correlation between proteostasis and proliferation using a proteome allocation model in mammalian cells YE Ho, M Mori, T Hwa, EJ Bennett MOLECULAR BIOLOGY OF THE CELL 29 (26), 2018 | | 2018 |